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(NAS Colloquium) Links Between Recombination and Replication: Vital Roles of Recombination (2002)
Proceedings of the National Academy of Sciences (PNAS)

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Colloquium on Links Between Recombination and Replication: Vital Roles of Recombination

 

 

Bacteriophage T4 gene 41 helicase and gene 59 helicase-loading protein: A versatile couple with roles in replication and recombination
Charles E.Jones, Timothy C.Mueser, Kathleen C.Dudas, Kenneth N.Kreuzer, and Nancy G.Nossal

 

8312

 

 

Instability of repetitive DNA sequences: The role of replication in multiple mechanisms
Malgorzata Bzymek and Susan T.Lovett

 

8319

 

 

Repeat expansion by homologous recombination in the mouse germ line at palindromic sequences
Zhi-Hong Zhou, Ercan Akgün, and Maria Jasin

 

8326

 

 

Stationary-phase mutation in the bacterial chromosome: Recombination protein and DNA polymerase IV dependence
Harold J.Bull, Mary-Jane Lombardo, and Susan M.Rosenberg

 

8334

 

 

Managing DNA polymerases: Coordinating DNA replication, DNA repair, and DNA recombination
Mark D.Sutton and Graham C.Walker

 

8342

 

 

Roles of DNA polymerases V and II in SOS-induced error-prone and error-free repair in Escherichia coli
Phuong Pham, Savithri Rangarajan, Roger Woodgate, and Myron F.Goodman

 

8350

 

 

Accuracy of lesion bypass by yeast and human DNA polymerase η
M.Todd Washington, Robert E.Johnson, Louise Prakash, and Satya Prakash

 

8355

 

 

ATP bound to the origin recognition complex is important for preRC formation
Richard D.Klemm and Stephen P.Bell

 

8361

 

 

Creating a dynamic picture of the sliding clamp during T4 DNA polymerase holoenzyme assembly by using fluorescence resonance energy transfer
Michael A.Trakselis, Stephen C.Alley, Ernesto Abel-Santos, and Stephen J.Benkovic

 

8368

 

 

Interaction of the β sliding clamp with MutS, ligase, and DNA polymerase I
Francisco J.López de Saro and Mike O’Donnell

 

8376

 

 

Defining the roles of individual residues in the single-stranded DNA binding site of PcrA helicase
Mark S.Dillingham, Panos Soultanas, Paul Wiley, Martin R.Webb, and Dale B.Wigley

 

8381

 

 

Homologous DNA recombination in vertebrate cells
Eiichiro Sonoda, Minoru Takata, Yukiko M.Yamashita, Ciaran Morrison, and Shunichi Takeda

 

8388

 

 

Meiotic recombination and chromosome segregation in Schizosaccharomyces pombe
Luther Davis and Gerald R.Smith

 

8395

 

 

Manipulating the mammalian genome by homologous recombination
Karen M.Vasquez, Kathleen Marburger, Zsofia Intody, and John H.Wilson

 

8403

 

 

Assembly of RecA-like recombinases: Distinct roles for mediator proteins in mitosis and meiosis
Stephen L.Gasior, Heidi Olivares, Uy Ear, Danielle M.Hari, Ralph Weichselbaum, and Douglas K.Bishop

 

8411

 

 

Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA
Xiong Yu, Steven A.Jacobs, Stephen C.West, Tomoko Ogawa, and Edward H.Egelman

 

8419

 

 

Homologous genetic recombination as an intrinsic dynamic property of a DNA structure induced by RecA/Rad51-family proteins: A possible advantage of DNA over RNA as genomic material
Takehiko Shibata, Taro Nishinaka, Tsutomu Mikawa, Hideki Aihara, Hitoshi Kurumizaka, Shigeyuki Yokoyama, and Yutaka Ito

 

8425

 

 

The synaptic activity of HsDmc1, a human recombination protein specific to meiosis
R.C.Gupta, E.Golub, B.Bi, and C.M.Radding

 

8433

 

 

Complex formation by the human RAD51C and XRCC3 recombination repair proteins
Jean-Yves Masson, Alicja Z.Stasiak, Andrzej Stasiak, Fiona E.Benson, and Stephen C.West

 

8440

 

 

Rad54 protein stimulates the postsynaptic phase of Rad51 protein-mediated DNA strand exchange
Jachen Armon Solinger and Wolf-Dietrich Heyer

 

8447

 

 

The architecture of the human Rad54-DNA complex provides evidence for protein translocation along DNA
Dejan Ristic, Claire Wyman, Coen Paulusma, and Roland Kanaar

 

8454

 

 

DNA replication meets genetic exchange: Chromosomal damage and its repair by homologous recombination
Andrei Kuzminov

 

8461

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Front Matter (R1-R3)
Links between recombination and replication: Vital roles of recombination (8172-8172)
Historical overview: Searching for replication help in all of the rec places (8173-8180)
Rescue of arrested replication forks by homologous recombination (8181-8188)
Circles: The replication-recombination-chromosome segregation connection (8189-8195)
Participation of recombination proteins in rescue of arrested replication forks in UV-irradiated Escherichia coli need not involve recombination (8196-8202)
Effects of mutations involving cell division, recombination, and chromosome dimer resolution on a priA2::kan mutant (8203-8210)
RecA protein promotes the regression of stalled replication forks in vitro (8211-8218)
Topological challenges to DNA replication: Conformations at the fork (8219-8226)
Rescue of stalled replication forks by RecG: Simultaneous translocation on the leading and lagging strand templates supports an active DNA unwinding model of fork reversal and Holliday junction formation (8227-8234)
Formation of Holliday junctions by regression of nascent DNA in intermediates containing stalled replication forks: RecG stimulates regression even when the DNA is negatively supercoiled (8235-8240)
Single-strand interruptions in replicating chromosomes cause double-strand breaks (8241-8246)
Handoff from recombinase to replisome: Insights from transportation (8247-8254)
Break-induced replication: A review and an example in budding yeast (8255-8262)
Links between replication and recombination in Saccharomyces cerevisiae: A hypersensitive requirement for homologous recombination in the absence of Rad27 activity (8263-8269)
Evidence that replication fork components catalyze establishment of cohesion between sister chromatids (8270-8275)
Rad52 forms DNA repair and recombination centers during S phase (8276-8282)
A yeast gene, MGS1, encoding a DNA-dependent AAA+ ATPase is required to maintain genome stability (8283-8289)
The tight linkage between DNA replication and double-strand break repair in bacteriophage T4 (8290-8297)
Mediator proteins orchestrate enzyme-ssDNA assembly during T4 recombination-dependent DNA replication and repair (8298-8305)
Two recombination-dependent DNA replication pathways of bacteriophage T4, and their roles in mutagenesis and horizontal gene transfer (8306-8311)
Bacteriophage T4 gene 41 helicase and gene 59 helicase-loading protein: A versatile couple with roles in replication and recombination (8312-8318)
Instability of repetitive DNA sequences: The role of replication in multiple mechanisms (8319-8325)
Repeat expansion by homologous recombination in the mouse germ line at palindromic sequences (8326-8333)
Stationary-phase mutation in the bacterial chromosome: Recombination protein and DNA polymerase IV dependence (8334-8341)
Managing DNA polymerases: Coordinating DNA replication, DNA repair, and DNA recombination (8342-8349)
Roles of DNA polymerases V and II in SOS-induced error-prone and error-free repair in Escherichia coli (8350-8354)
Accuracy of lesion bypass by yeast and human DNA polymerase n (8355-8360)
ATP bound to the orgin recognition complex is important for preRC formation (8361-8367)
Creating a dynamic picture of the sliding clamp during T4 DNA polymerases holoenzyme assembly by using fluorescence resonance energy transfer (8368-8375)
Interaction of the ß sliding clamp with MutS, ligase, and DNA polymerase I (8376-8380)
Defining the roles of individual residues in the single-stranded DNA binding site of PcrA helicase (8381-8387)
Homologous DNA recombination in vertebrate cells (8388-8394)
Meiotic recombination and chromosome segregation in Schizosaccharomyces pombe (8395-8402)
Manipulating the mammalian genome by homologous recombination (8403-8410)
Assembly of RecA-like recombinases: Distinct roles for mediator proteins in mitosis and meiosis (8411-8418)
Domain structure and dynamics in the helical filaments formed by RecA and Rad51 on DNA (8419-8424)
Homologous genetic recombination as an intrinsic dynamic property of a DNA structure induced by RecA/Rad51-family proteins: A possible advantage of DNA over RNA as genomic material (8425-8432)
The synaptic activity of HsDmc1, a human reccombination protein specific to meiosis (8433-8439)
Complex formation by the human RAD51C and XRCC3 recombination repair proteins (8440-8446)
Rad54 protein stimulates the postsynaptic phase of Rad51 protein-mediated DNA strand exchange (8447-8453)
The architecture of the human Rad54-DNA complex provides evidence for protein translocation along DNA (8454-8460)
DNA replication meets genetic exchange: Chromosomal damage and its repair by homologous recombination (8461-8468)
Colloquium Program (8469-8471)
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