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Biodiversity II: Understanding and Protecting Our Biological Resources (1997)
Joseph Henry Press (JHP)

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National Research Council. "Index." Biodiversity II: Understanding and Protecting Our Biological Resources. Washington, DC: The National Academies Press, 1997. 1. Print.

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INDEX

A

Acanthocephala, 244

Acarina, 58

Accipiter cf. rufitorques (short-winged hawk), 155

Acid precipitation, 11, 134, 135

Acraeini, 76

Acrocephalus sp. (warblers), 152, 153

Adalia decempunctata (ten-spot ladybird), 42

Adams, Mark D., 289, 299, 518

Africa

  birds, 46, 144

  extinctions, 144, 515

Agaricus bisphorus (fungus), 116, 117

Agassiz, Louis, 452

Agenda 21, 390

Agriculture.

  See also Crops;

  Fertilizers

  biodiversity losses due to, 10, 13, 127, 134, 378

  bioengineering, 220, 518

  biological pest control, 219-220, 222-224, 225, 226, 234-235, 283-284, 517

  climate change and, 12

  contributions of biodiversity, 8-9, 217-219, 220, 224, 513

  ecosystem effects, 142, 218

  export, 401-402

  integrated pest management, 221, 517

  origin, 399-400, 519

  pest introductions and quarantine, 222-224, 227, 517

  pesticides, 218-219

  pests, 218, 219, 223, 225, 234, 517

  pollution, 127

  sustainable, 221-222, 390, 399-400, 401-402

  systematics, 219-220, 224-225, 227, 517

  wetlands losses, 129, 130

Agrobacterium tumefaciens (bacterium), 284

Aguirre, Alvaro, 344

Ailuroedus sp. (catbirds), 266, 267

Alaska, 152, 157

Albatrosses, 149

Alcataenia (cestodes), 255, 256

Alcidae, 255

Aldabra Atoll, 86

Alder, 177

Aleutian Islands, 255

Algae

  brown, 111

  described species, 96

  dimethyl sulphide production, 283

  freshwater, 18-22, 89, 90

  green, 111-113

  marine, 89, 90, 96

  number of species, 90, 366

  red, 111 113

Algal blooms, 13

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527
Front Matter (R1-R8)
1 Introduction (1-4)
Part I The Meaning and Value of Biodiversity: 2 Biodiversity: What Is It? (5-14)
3 Biodiversity: Why Is It Important? (15-24)
Part II Patterns of the Biosphere: How Much Biodiversity Is There?: 4 Biodiversity at Its Utmost: Tropical Forest Beetles (25-40)
5 Measuring Global Biodiversity and Its Decline (41-68)
6 Butterfly Diversity and a Preliminary Comparison with Bird and Mammal Diversity (69-82)
7 The Global Biodiversity of Coral Reefs: A Comparison with Rain Forests (83-108)
8 Common Measures for Studies of Biodiversity: Molecular Phylogeny in the Eukaryotic Microbial World (109-122)
Part III Threats to Biodiversity: What Have We Lost and What Might We Lose?: 9 The Rich Diversity of Biodiversity Issues (123-138)
10 Human-Caused Extinction of Birds (139-162)
11 Global Warming and Plant Species Richness: A Case Study of the Paleocene/Eocene Boundary (163-186)
12 Plant Response to Multiple Environmental Stresses: Implications for Climatic Change and Biodiversity (187-196)
Part IV Understanding and Using Biodiversity: 13 Names: The Key to Biodiversity (197-212)
14 Systematics: A Keystone to Understanding Biodiversity (213-216)
15 Biodiversity and Systematics: Their Applications to Agriculture (217-230)
16 Snout Moths: Unraveling the Taxonomic Diversity of a Speciose Group in the Neotropics (231-242)
17 Phylogeny and Historical Reconstruction: Host-Parasite Systems as Keystones in Biogeography and Ecology (243-262)
18 Comparative Behavioral and Biochemical Studies of Bowerbirds and the Evolution of Bower-Building (263-276)
Part V Building Toward a Solution: New Directions and Applications: 19 Microbial Biodiversity and Biotechnology (277-288)
20 The Impact of Rapid Gene Discovery Technology on Studies of Evolution and Biodiversity (289-300)
21 Initial Assessment of Character Sets from Five Nuclear Gene Sequences in Animals (301-320)
22 Gap Analysis for Biodiversity Survey and Maintenance (321-340)
23 Conservation of Biodiversity in Neotropical Primates (341-356)
24 Using Marine Invertebrates to Establish Research and Conservation Priorities (357-370)
25 Ecological Restoration and the Conservation of Biodiversity (371-388)
26 Tropical Sustainable Development and Biodiversity (389-410)
27 Wildland Biodiversity Management in the Tropics (411-432)
Part VI Getting the Job Done: Institutional, Human, and Informational Infrastructure: 28 Taxonomic Preparedness: Are We Ready to Meet the Biodiversity Challenge? (433-446)
29 Museums, Research Collections and the Biodiversity Challenge (447-466)
30 Resources for Biodiversity in Living Collections and the Challenges of Assessing Microbial Biodiversity (467-474)
31 Integration of Data for Biodiversity Initiatives (475-490)
32 Information Management for Biodiversity: A Proposed U.S. National Biodiversity Information Center (491-504)
Part VII Conclusions: 33 Santa Rosalia, the Turning of the Century, and a New Age of Exploration (505-524)
Photo Credits (525-526)
Index (527-552)

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--> INDEX A Acanthocephala, 244 Acarina, 58 Accipiter cf. rufitorques (short-winged hawk), 155 Acid precipitation, 11, 134, 135 Acraeini, 76 Acrocephalus sp. (warblers), 152, 153 Adalia decempunctata (ten-spot ladybird), 42 Adams, Mark D., 289, 299, 518 Africa   birds, 46, 144   extinctions, 144, 515 Agaricus bisphorus (fungus), 116, 117 Agassiz, Louis, 452 Agenda 21, 390 Agriculture.   See also Crops;   Fertilizers   biodiversity losses due to, 10, 13, 127, 134, 378   bioengineering, 220, 518   biological pest control, 219-220, 222-224, 225, 226, 234-235, 283-284, 517   climate change and, 12   contributions of biodiversity, 8-9, 217-219, 220, 224, 513   ecosystem effects, 142, 218   export, 401-402   integrated pest management, 221, 517   origin, 399-400, 519   pest introductions and quarantine, 222-224, 227, 517   pesticides, 218-219   pests, 218, 219, 223, 225, 234, 517   pollution, 127   sustainable, 221-222, 390, 399-400, 401-402   systematics, 219-220, 224-225, 227, 517   wetlands losses, 129, 130 Agrobacterium tumefaciens (bacterium), 284 Aguirre, Alvaro, 344 Ailuroedus sp. (catbirds), 266, 267 Alaska, 152, 157 Albatrosses, 149 Alcataenia (cestodes), 255, 256 Alcidae, 255 Aldabra Atoll, 86 Alder, 177 Aleutian Islands, 255 Algae   brown, 111   described species, 96   dimethyl sulphide production, 283   freshwater, 18-22, 89, 90   green, 111-113   marine, 89, 90, 96   number of species, 90, 366   red, 111 113 Algal blooms, 13

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--> All Taxa Biodiversity Inventories (ATBI)   benefits, 57, 203, 416-417, 420-421, 438   effectiveness, 438-439, 520   microbial diversity, 472-473   resource requirements, 439-440   sampling regimes, 32-37, 87, 520 Alligator Reef, Florida, 87 Alligatorweed, 235 Alnus sp. (alder), 177 Alouatta sp. (howler monkey), 342 Alveolates, 113 Amazon River basin   biodiversity services, 9-10   birds, 78   butterflies, 69, 75, 76, 78, 79   extractive reserves, 395   fishery, 9-10   habitat fragmentation, 11   hydrological cycle, 10   mammals, 78   Pacific Ocean linkages, 249, 251-253, 258, 516 Amazonia, 11, 134, 136, 181, 400-401 Amblyornis macgregoriae (Macgregor's bowerbird), 268, 270-271, 274 Amblyornis sp. (maypole bower builders), 266, 267, 270-271, 272 Amblyornis subalaris (streaked bowerbird), 268 American Association of Zoos and Aquaria, 352 American Museum of Natural History, 451 American Type Culture Collection, 3, 467-471, 513 Amoeba, 113 Amphibians, 78 Amphipods, 365 Amyelois transitella (naval orangeworm), 235 Anas superciliosa (duck), 153, 155 Anchovies, 252 Andes mountains, 142, 146, 224, 251-252, 457 Andropogon virginicus (grass), 192 Anophryocephalus (pinniped), 247, 255, 256 Anous sp. (tern), 151 Antarctica, insects, 28 Ants   attine, 116-117   number of species, 8, 31, 97   phylogeny, 117 Aotus (owl monkeys), 342 Apicomplexans, 113 Aplonis tabuensis (starling), 156 Apterostigma sp., 116, 117 Aptornithids, 148 Aquatic organisms and systems.   See also Freshwater;   Marine;   individual species   caterpillars, 233   helminthic parasites, 250-251   number of species, 89, 90   weeds, 235 Aquila chrysaetos canadensis (golden eagle), 145 Arabidopsis thaliana (mouse-ear cress), 292-293 Araceae, 233 Araneae, 64 Archaea, 111, 119-120, 515 Archboldia papuensis (Archbold's bowerbird), 267, 272-273, 274 Aristotle, 508 Arizona   butterflies, 73, 74   gap analysis of biodiversity, 322 Arkansas, butterflies, 73, 74 Artemiq sp. (brine shrimp), 311 Arthropods.   See also Insects;   Crustaceans BIOTA database, 206 Ascaris suum (nematode), 310 Ascomycetes, 226 Ascomycotines, 116 Asia   birds, 144   wetlands, 129 Assessment of biodiversity. See Gap analysis;   Measurement of biodiversity Aster pilosus, 192 Atalopedes campestri, 74 Ateles (spider monkey), 342 Athelia bombacina, 117 Atitlan, Lake, 128 Atlantic Ocean, 145 Atta cephalotes, 117 Atta sp. (ants), 116 Attamyces bromatificus, 116 Auricularia polytricha, 117 Australia   birds, 144, 267   climate, 169   extinctions, 144   insects, 7, 48, 49   introduced species, 235   marine species, 86, 96   plants, 235   reserve selection, 335   vertebrates, 7-8

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--> Australian Environmental Resources Information Network (ERIN), 484-487, 497 Avena fatua (wild oat), 192 Avocado, 178 B Babbitt, Bruce, 13, 454, 489 Baccharis pilularis (coyote bush), 328 Bacteria.   See also Microbial diversity;   specific bacteria   aquatic, 89, 119, 285   autotoxins, 18   benefits, 9, 282-284   diversity, 281-282   evolution, 111, 515   in extreme environments, 13, 119, 285   nitrogen-fixing, 17, 283   spiral, 118 Bacteriophages, 96 Bahamas, 87 Baikal, Lake, 127 Baird, Spencer, 13 Bald eagle, 145 Banana, 235 Barn-owls, 148, 155 Barranca del Cobre, Mexico, 143 Barro Colorado Island, 11, 334 Basidiomycotines, 116 Bats, 77, 133 Bees, 97 Beetles (Coleoptera).   See also Tropical forest beetles   biological control agents, 221   collections, 47-48   described species, 29, 97   discrete assemblages, 38   distribution, 28, 32, 45, 47-48, 49, 54   diversity, 53, 514   ecological implications of data, 29, 31   ecosystem roles, 31   host specificity, 54, 221   number of species, 32-33, 49, 51, 53, 56   recorded history, 29   threats to, 61 Belém, Brazil, 75, 79 Belgium, 58 Beltsville Agricultural Research Center, 221 Bemisia argentifolii (silverleaf whitefly), 220, 227 Bemisia tabaci complex (sweet potato whitefly), 220 Berlese banks, 34 Bicosoecids, 111, 113, 115 Big Pine Key, Florida, 87 BIN21. See Biodiversity Information Network Biodiversity Forum. See National Forum on Biodiversity Biodiversity Information Network, 497-498 Biodiversity losses.   See also Extinctions   agriculture-related, 10   behavioral variability, 263-264, 516   coral reefs, 85   ecosystem effects, 154   evolutionary consequences, 132-134, 263   extirpations, 147, 150, 153, 154   genetic variability, 131, 352, 515   from human activities, 1, 61, 103, 126-136, 140-158, 164, 187, 359, 404, 411-414, 435, 492, 507-512, 515-516   pollution and, 10   populations, 131, 147, 515   projected, 136   recovery, 10, 132-133 Biodiversity Treaty, 412.   See also Convention on Biodiversity Biogeographic realm.   See also individual realms butterfly distribution, 71-72, 77-78, 514 Biogeography.   See also Island biogeography historical, 243, 245 Biomass, 7 Bioremediation, 9, 280, 285.   See also Ecological restoration Biosystematic Database of World Diptera, 206 Biosystematic Information on Terrestrial Arthropods (BIOTA), 206 Biotechnology   growth of industry, 280-281, 518   history, 279   innovations, 279-280   microbial diversity, 279, 284-285, 515 Birch trees, 177 Birds.   See also individual species   African passerines, 46   butterfly diversity, 76-78, 514   concordance patterns, 305-308   conservation, 141   continental species, 143-146, 515   discovery rates, 158   distribution, 46, 78, 79   endemic areas, 141, 142

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-->   extinctions, 11, 60, 61, 64, 139-158, 515-516   extirpations, 147, 150, 153, 154   habitat destruction, 11, 129-130, 142, 144, 154, 515   island species, 147-156, 515   number of species, 78   parasites, 247   range contractions, 145   restricted-range species, 141, 142   threatened species, 45, 126, 154, 518   tropical forests, 140   United States, 77, 154   waterfowl, 129-130   wetlands, 130 Birds of paradise, 267 Bismarck Sea, 366 Black-headed vireo, 146 Blake, Judith A., 289-299, 518 Boletus santanas (fungus), 117 Bolivia   insects, 59, 76   marsupials, 253   primates, 348   wetlands, 129   Yungas-Chaco ecotone, 253, 258 Bombyx mori (silkworm), 311 Borgia, Gerald, 263-276, 515-516 Borneo, insects, 53, 54, 55, 234 Bos taurus (cattle), 310 Botswana, wetlands, 129 Bowerbird evolution.   See also individual species   avenue builders, 266, 267, 269-270   bowers, 265-271   comparative studies, 264, 266, 515-516   courts, 266, 267, 272-273   displays, 265-271, 516   distribution, 264   hypothesis, 265-266, 267-273, 516   leks, 271-272   mate selection, 265   maypole-builders, 266, 267, 270-271   model, 267-268, 273-274   non-bower-building, 271-273   phylogeny, 266, 267 Brachyteles sp. (muriqui), 342, 344 Brassica napus (oilseed rape), 293 Brazil   birds, 142   conservation politics, 345-346, 395-396, 403-404, 519   deforestation, 345-346   insects, 48, 49, 75, 76, 79   Itatiaia National Park, 75, 76   Poço das Antas Reserve, 348   primates, 344, 348, 349, 352, 353   Serra do Japi Reserve, 76   Tijuca Forest, 403-404   Una Biological Reserve, 346, 353   wetlands, 129 Breeding Bird Survey, 326 British Museum of Natural History (London), 44, 47-48, 54, 234, 238, 522 Brunei, insects, 54 Bryozoans, cheilostome, 87 Bulletin of Zoological Nomenclature, 205 Bult, Carol J., 289-299, 518, 521 Bulweria cf. bulwerii (petrel), 151 Bureau of Biological Survey, 455 Butterfly diversity.   See also individual families and species   biogeographic realm, 71-72, 77-78, 79, 514   bird/mammal diversity and, 76-78, 514   geographic variation, 69-72, 78   host-specificity, 53-54   insect species estimates from, 48   named species, 69, 79, 97   neotropical, 75-76   number of species, 70-71, 78, 231   regular colonists, 72-74   residents, 72-74   threats to, 61   United States, 72-74   vagrants, 72-74 C Cacajao (uakari), 342 Cacaulandia, Rondônia, Brazil, 76 Cactoblastis cactorum (cactus moth), 235 Cadra Walker (almond moth), 234 Caenorhabditis elegans (nematode), 291, 293, 310, 311 Cafeteria roenbergensis (marine flagellate), 114 California, butterflies, 73, 74 California Geological Survey, 453 California gnatcatcher, 11, 146 Callicebus sp. (titi monkey), 342 Callimico sp. (Goeldi's monkey), 342 Callithrix sp. (marmosets), 342, 343, 344, 352 Cameroon, 58

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--> Campephilus imperialis (imperial woodpecker), 143 Campephilus principalis (ivory-billed woodpecker), 143, 145 Canada, 157, 222-223 Capitella capitata (polychaete worm), 95 Captive breeding and rearing, 141, 351-352, 519 Carabids, 97 Carbon cycle, 283 Carbon dioxide   bacteria and, 283   global warming, 12, 168-170, 188   plant response to, 189-190, 192, 193-194 Cardueline finches, 148 Caribbean Sea, 145, 366 Carolina parakeet, 145 Carson, Rachel, 218 Caspian Sea, 179 Cassava, 225, 517 Caterpillars, snout moth, 233 Cavia sp. (guinea pig), 305, 310 Cebuella sp. (pygmy marmoset), 342, 344 Cebus sp. (capuchin monkey), 342 Cenozoic era, 164, 165, 167, 171, 173, 175, 318 Central America   birds, 142, 144   butterflies, 72   extinctions, 144   plants, 165 Centrocerus urophasianus (sage grouse), 146, 329 Ceratitis capitata (Mediterranean fruit fly), 209 Cercidiphyllum sp., 177 Cetaceans, 247 Cettia sp. (warblers), 155 Chalcidoid, 97 Chendytes lawi (flightless duck), 145 Chesapeake Bay, 10, 282 Chilo sp. (rice borers), 234, 235 China. See People's Republic of China Chiropotes sp. (bearded sakis), 342 Chlamydera maculata (spotted bowerbird), 264, 273 Chlorofluorocarbons, 9, 135, 192 Chlorophytes, 111 113 Cholera, 286 Chordates, 90 Chordeiles minor (nighthawk), 146 Christmas Island, 149, 150 Chromophytes, 111 Chrysauginae, 233 Chrysomelids, 36, 97 Cicadellid bugs, 97 Ciliates, 113 Circulifer tenellus (sugar beet leafhopper), 226 Civilian Conservation Corps, 403-404, 519 Classification of species   approaches, 201-202   bacteriological code, 205   binomial nomenclature, 204   botanical code, 205   butterflies, 69, 79   cataloging, 206   circumscription, 203   cladistic, 201   Codes of Nomenclature, 203   common names, 199   DELTA format, 207   disagreements, 200-201   family-group names, 206   hierarchical, 200   history, 204-205   holistic approach, 2   holotypes, 43-44   homonymy, 202-203, 206   identification aids, 207-210, 215-216, 238-239, 518   importance, 199, 517   information management, 203, 206-207, 236;   see also specific databases   Latin grammar, 205   multiple, 201-202   nomenclature, 199   number named and described, 27, 42-60, 89-97   original name, 202   phenetic, 201   phylogenetic, 201;   see also Molecular phylogeny;   Phylogeny   primates, 342-343   priority, 203   problems, 202-203, 238   rate of description, 444-445   registers, 42   resources, 204   scientific names, 200-201   species problem, 203   standardization, 205-206   synonymy, 42-43, 202-203, 206, 220, 238, 239   tags, 199-200

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-->   two-key, 201-202   universal data dictionary, 204   valid name, 202   zoological code, 205 Clayton, Rebecca, 289-299, 518 Climate. See Global climate change Cliniodes Guenée (snout moth), 234 Clytorhyncus vitiensis (monarch), 155 Coastal zones   degradation, 84, 100   marine archaebacteria, 120   species diversity, 88, 89, 91-93   surface area, 88-89   tropical, 88, 89-92;   see also Coral reefs Coastal sage scrub habitat, 11 Cocconeis placentula (diatom), 22 Coconut, 235 Coleophora laricella (larch casebearer), 220 Collections, 43-44, 45, 47-48, 359.   See also Research collections Collembola, 58 Collocalia sp. (swift), 152, 155 Colombia   birds, 78, 139, 141, 146   epidemics, 286   insects, 48, 49, 76, 78   primates, 342   wetlands, 139 Columbus, Christopher, 399, 519 Colwell, Rita R., 279-287, 515, 518, 520 Conestoga River Basin, 17 Conifers, 15 Connecticut State Geological and Natural History Survey, 453 Conservation.   See also Captive breeding   birds, 141, 154, 157   characterization, 203-204   coral reefs, 357, 359, 366-367   ecosystem approach, 333-334   education strategies, 350, 352-353   gap analysis, 333-334, 518   genetic diversity, 343   habitat fragmentation, 11   hotspots, 128   INBio approach, 199   information management and networking, 349   insects, 79, 514   international cooperation, 352, 519   Population and Habitat Viability Analysis, 350, 353   Population Viability Analysis, 350   preventive approach, 360   primates, 344, 345, 349-353, 518-519   priorities, 76, 141, 154, 258, 296, 344, 357, 359, 367, 514   Rapid Assessment Program Team, 31   scientific methods, 350, 357, 518-519   training, 157, 350 Conservation International, 349 Conserved wildlands   management, 424-430, 519-520   perceptions, 411-413   use, 427-430 Consortium for Systematics and Biodiversity, 3, 32, 513, 522 Consortium of State Biological Surveys, 454, 522 Consumption, human   net terrestrial primary productivity, 83 Continents, extinction of birds on, 143-146, 515 Convention on Biological Diversity, 394, 472 Cook Islands, 149, 150, 153 Coprinus cinereus (fungus), 117 Coral reef biodiversity.   See also specific reefs and species   complexity, 83   components, 87   conservation, 357, 362, 366-367   cryptofauna, 87   described species, 91-94, 102, 514   distribution patterns, 99, 357-358, 514   documentation, 361   endemism, 358-359   estimates, 85-93, 94   extinctions, 85, 284, 359, 514   global, 88   hotspots, 130   known vs. unknown, 94, 96-97   rain forests compared to, 86, 87, 88, 91-93, 100-101, 514   size of species, 97-100, 102-103, 519   status, 84-85   taxonomy, 360   threats to, 84   value, 83-84 Coral reefs   black band disease, 100   bleaching, 84   hypersalinization, 13   reef-building species, 95

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-->   site selection, 366-367   surface area, 88-89 Corn, 8-9, 143, 222, 223, 224, 234, 235, 375 Cornell University, 214 Corvus corax (raven), 145 Corvus coronoides (crow), 269 Corvus ossifragus (fish crow), 145 Costa Rica   birds, 142   butterflies, 75   Guanacaste Conservation Area, 32-33   La Selva field station, 75   snout moths, 232, 233, 235-239   sustainable development, 430 Cover, Stefan P., 449 Crabs, 95 Cracraft, Joel, 435-446, 517, 520-521, 522 Crambidae, 234 Crambinae, 235, 238 Craneflies, 18 Cretaceous period, 251, 253, 425 Cretaceous/Tertiary boundary, 181 Cricetulus longicaudatus (hamster), 311 Crinoids, 365 Crops   germplasm, 224, 227   pest resistance, 8-9, 224   UV radiation effects, 193-194 Crustaceans   amphipod, 96, 365   coral reef, 87, 91   decapod, 87, 95   deep sea, 86   described, 96   extinctions, 101   isopod, 96   stomatopod, 98-99 Cryptomonads, 111-112, 115 Csuti, Blair, 321-340, 514, 518, 520, 521 Cuba, 143 Curculionids, 97 Cucurbitaceae, 233 Curlews, 146, 152, 153 Curtis Prairie, 384 Cyanobacteria, 115, 119, 283 Cyphomyrmex sp. (ant), 116, 117 D Dams, 129, 130 Darwin, Charles, 265, 357, 508 Data collection.   See also Information management   bar-code labels, 236   spreadsheet templates, 37   field data sets, 34-35   sampling regimes, 32-33 Databases.   See also specific databases   biodiversity, 294-295   Diptera, 206   fruit fly, 207, 209-210   genetic sequence, 111, 290, 291-292, 294-295, 518   identification aids, 207-210, 518   molecular, 116-117   RNA sequences, 111   terrestrial arthropods, 206 Davies Reef, 365 DDT, 218 Declio gigas (kookaburra), 269 Deep sea   extinctions, 172-173   species diversity, 86, 95, 96, 366   temperatures, 171 Definition of biodiversity, 1, 15 Deforestation, 129   control, 390-391   effects, 285, 348   erosion, 149   extinction, 52, 140, 149   habitat loss, 1-2, 335-336   oceanic islands, 149   projections, 135   rates, 11, 133, 135   reversibility, 402-403   tolerant species, 152   transportation infrastructure, 398-399   tropical, 1-2, 11, 133, 140 Dendroica cerulea (cerulean warbler), 146 Dendroica kirtlandii (Kirtland's warbler), 146 Dendroica petechia (yellow warbler), 157 Desertification, 135 Detritivores, 18 Diaphania Stephens (snout moth), 233 Diatoms, 22-23, 111-112 Diatraea saccharalis Fabricius (sugarcane borer), 235 Dicaeum quadricolor (Cebu flowerpecker), 139-140 Didemnidaceae, 284 Didemnins, 284 Didunculus sp. (pigeon/dove), 155

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--> Dietz, James M., 341- 356, 514, 518-519, 521 Dimethyl sulphide, 283 Dinoflagellates, 111, 113, 115 Dipodomys deserti, 326 Diplomonads, 111 Diptera (flies), 48, 305-309 Dispersal, 12, 98, 101 Distribution of species. See Gap analysis;   Geographic distribution and range DIVERSITAS network, 416- 417, 436 Doves, 148, 149, 150, 151, 152, 153, 155 Dragonflies, 78 Drosophila melanogaster (fruit fly), 302, 310, 311 Drought, 190-191, 192 Drugs and pharmaceuticals   analgesics, 284   antibiotics, 9, 284   antihypertensives, 9   antileukemic, 284   aspirin, 9   plant-derived, 9, 84, 134, 279, 280, 284-285, 391 Dry Tortugas, 87 Ducks, 145, 148, 152, 153, 155 Ducula sp. (pigeons, doves), 151, 153, 155 E Eagles, 148 Easter Island, 149-150 Eclectus sp. (parrot), 155 Ecological processes, and local diversity, 100-101 Ecological restoration   authenticity, 379-381   community building, 383-386, 519   conservation role, 374-375, 381, 519   definition, 372-373, 374   estuary, 378   experience, 382-383   forms, 372-374, 375, 379   impediments, 369-370   potential, 374, 427   prairies, 373, 375-376, 378 379, 381, 384   preservation, 372-373   principles, 371   process, 378, 381-382   quality issues, 375-379   successional, 379   wetlands, 377-378 Ecology, historical, 243, 245 Ecosystem management, integrated approach, 13 Ecosystems   classifying and mapping, 322-326   indicators of change, 10, 29, 31, 519   niche concept, 326-327   perspectives on biodiversity, 9-10, 17-24 Ecotourism, 84, 391, 427-429 Ecuador   birds, 141, 142   epidemics, 286   insects, 48, 76 Edward, Lake, 127 Egretta sacra (heron), 151, 155 Eiseley, Loren, 383 El Niño Southern Oscillation, 285, 286 El Salvador, 396 Elachertus sp. (parasitic wasp), 220 Elasmobranchs, 249, 251-253, 258 Eliade, Mircea, 380 Elm trees, 177 EMBL database, 111, 290, 303 Endangered species. See Threatened and endangered species Endangered Species Act, 333 Endemic bird areas, 141, 142 Endemism   assessment, 59   birds, 139, 141   coral reef species, 358-359   and extinction, 100   genetic diversity, 131   host-parasite systems and, 248, 257-258   lakes, 125-127, 515   marine vs. terrestrial, 86   moths, 233   wetlands, 129, 130-131 Entomological Collections Network, 206 Environmental monitoring, 29, 345-347, 519 Eocene epoch, 167-170, 171-173, 175, 176-181 Eopsaltria sp. (whistlers, robins), 155 Ephemerella sp. (mayfly), 22-23 Epimachus albertsil (brown sickelbill), 267 Epipaschiinae, 234 ERIN. See Australian Environmental Resources Information Network Erosion, 2, 84, 127, 149 Erwin, Terry L., 8, 27-40, 513-514, 520 Escherichia coli (bacteria), 291 Estuarine salt flats, 28

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--> Ethiopian realm, 48 Etiella sp. (snout moth), 234, 235 'Eua, 149, 152, 154, 155-156 Eubacteria, 118 Eukaryotes, 111-114, 115, 118, 515 Euonymus japonica (Japanese evergreen euonymus), 221 Euplopiscium fishelsoni (surgeonfish symbiont), 116-118 Europe   birds, 144   fish, 128   insects, 69 Eutrophication, 84   Evolution, 86.   See also Bowerbird evolution;   Historical reconstruction   biodiversity losses and, 132-134   body size, 97-103, 118   coral reefs/rain forest similarities, 100-101   coevolution, 116, 226, 246, 247-248, 515   comparative molecular studies, 291-292   divergence of species, 311-318, 341 342, 516   eukaryotes, 113-114, 118   eukaryotic crown, 113, 118   genetic markers, 110-111   inferring relationships, 109, 243, 245, 266-267, 291, 296, 301, 317, 436   of plastids, 114   primary lines of descent, 111, 515   of primates, 341-342, 347   rates of change, 111, 133, 316   stramenopiles, 114-115 Exotic species. See Introduced species Expressed Gene Anatomy Database (EGAD), 294-295 Expressed Sequence Tags (ESTs)   applications, 290-291   database, 294-295   molecular marker design, 292-293   multiple sequence alignment, 293-294, 301;   see also Nuclear-gene-sequence character assessment Extinctions   background, 102   birds, 60, 61, 139-158, 515-516   body size of species, 99-101, 103   causes, 11, 52, 61, 99-102, 147, 180, 181-182, 187   continental, 143-146   ecosystem effects, 157   estimation/prediction, 2, 60, 62-63, 136, 141, 350   freshwater species, 126, 128   geographic range, 101-102, 103   global warming, 172-173, 176-181, 182, 516   human-caused, 103, 132, 139-158   insects, 41, 52, 60-61, 101   island, 147-157   marine, 85, 99-103, 359, 514, 516   mass, 45, 102, 132, 133, 181   naturally occurring, 140, 147   Paleocene/Eocene, 176-181   plants, 176-181, 187   rates, 12, 45, 60-64, 102, 135-136, 140, 146, 147, 425, 514   recovery, 133, 179   spasms, 128, 132, 133   tropical species, 102   vulnerability, 99-100, 102, 103, 131-132, 139, 147, 191 Extreme environments   biodiversity, 119-120, 188, 285   plant response, 189 F Family planning, 135 Farr, David F., 475-490, 517, 518, 521 Fatty acid derivatives, 16 Fauchald, Kristian, 366 Fertilizers, 10, 13, 17 Fields, Chris, 289-299, 518 Figueres, Jose Maria, 430 Fires, 130, 189, 373, 381 Fish   cichlids, 127, 128, 515   coral reef, 83, 87   distribution in riverine systems, 18-22   freshwater, 89, 126-128   marine, 89   sampling, 87   threatened and endangered, 126   wetlands, 130 Fisheries   biodiversity services, 9-10   collapse, 13   coral reef, 87   overfishing, 127, 130 Fishing, 142 Flies, 31, 97 Flightless geese, 148

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--> Flightless rails, 148, 149, 152, 154 Flood control projects, 13, 126 Floods/flooding, 74 Florida   birds, 77   butterflies, 73, 74   ecosystem management, 13   coral reefs, 87, 362 Florida Keys National Marine Sanctuary, 362 Foggers/fogging, 33-34, 50, 53, 54, 59 Food webs, 17-24, 113, 157, 249, 257 Ford, Henry, 397, 519 Forests.   See also Tropical forests   burning, 12   old growth, 189   species composition, 188 Forminafera, 171, 172-173 Forseth, Irwin N., 187-196, 516 Fossils   climate record, 164-167, 168, 169, 171, 177-178, 188-189   primate, 342 Foulehaio carunculata (honeyeater), 156 France, 58 Fregata sp. (frigatebird), 149, 151 Fregetta grallaria (storm petrel), 151 Freshwater ecosystems.   See also Riverine systems   loss, 126, 515   species, 89, 90, 249, 251-253, 515 Friedlander, Timothy P., 301-320, 516, 518 Frogs, 10, 307-309 Fruit Fly Expert System, 207, 209-210 Fulmars, 149 Fundação Biodiversitas, 353 Fungi, 18   biological control agents, 226   cultures, 468-470   Imperfecti, 116   information management, 476-484   number of species, 90, 282   phylogeny, 117   plant ratio, 49-50   symbionts, 116 Fungiid corals, 364 G Galapagos Islands, 127, 147 Galleriinae, 233 Gallicolumba sp. (pigeons, doves), 151, 153, 155 Gallinula sp. (gallinule), 155 Gallirallus sp., 149, 151, 153, 155 Gallus gallus (bird), 310 Gap analysis   areas managed for biodiversity maintenance, 328, 331-333   classifying and mapping ecosystems, 322-326   conservation, 333-334, 345, 518   history, 322   reserve network selection, 334-337, 346-347   species distribution maps, 326-330   steps, 322   technology, 321-322, 518 Gatun Lake, 11 Geese, 148 GenBank, 111, 290, 303 Gene therapy, 282 General Agreement on Tariffs and Trade, 428 Genetic diversity   adaptability, 132   losses, 131, 132, 515   measurement of, 110-113;   see also Molecular phylogegy   population size, 139 Genetic sequences. See Molecular phylogeny;   Nuclear-gene-sequence character assessment;   Rapid gene discovery   concordance study, 302, 305-308   databases, 111, 290, 291-292, 294-295   mitochondrial DNA, 266, 267, 343, 516   rRNA sequence analysis, 110-112, 114, 116-117, 118, 119 Geographic distribution and range.   See also Biogeographic realm   body size, 98-100, 102-103   and extinction, 101-102, 103   knowledge of, 45-47   latitudinal trends, 54, 69, 71, 74, 91   mapping, 326-328   primates, 343-345   ranges, 48-49, 54 Geographic information systems (GIS), 321, 322-323, 345-347, 518 George, Lake, 127 Georgia   birds, 77, 78   butterflies, 73, 78

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--> Germplasm collections, 131.   See also Research collections, living Glaciers, 179, 181 Glaphyriinae, 234, 237-238 Gliocladium sp. (fungus), 226 Global climate change   carbon dioxide, 188, 195   carbon isotopes, 173   disturbance regimes, 189   ecological restoration, 375- 376   effects, 12, 84, 134, 135, 173-175, 187, 195, 255, 257, 258   environmental stresses, 190-192, 516   Eocene epoch, 167-170, 171   equable climate paradox, 167-170   extinctions, 172-173, 176-181, 182, 516   general circulation models, 163, 167-168, 181, 187-188, 516   greenhouse gases, 12, 187, 195, 283   Holocene deglaciation, 163, 179   host-parasite systems, 255, 257   introduced species, 194-195   leaf physiognomy, 164-167, 168, 169, 171   nearest living relative, 164   oxygen isotope studies, 166, 171   Paleocene-Eocene boundary, 163-164, 172, 176-181, 516   paleoclimate reconstructions, 164-167, 170, 181-182, 188-189   plant response, 188-189, 194-195   Pliocene-Pleistocene glaciations, 255, 256, 257, 516   proxy data, 163, 164, 166, 188   research approach, 182   response of species, 143, 179, 188-189, 257, 258, 516   Terminal Paleocene Event, 170-176, 179 Global Environment Facility, 126, 134 Glyphyriinae, 233 Golden-cheeked warbler, 146 Golden Lion Tamarin Conservation Program, 349 Gomphonema olivaceum (diatom), 22 Gray birch, 192 Great auk, 145 Great Barrier Reef, Australia, 87, 284, 362, 364 Great Lakes, 127 Greater prairie chicken, 146 Greece, 131 Greenhouse gases, 12, 169, 187, 195, 283 Greenland, 78 Guadalupe River, 18, 19, 24 Guam, 149, 365-366 Guanacaste Conservation Area, Costa Rica, 32-33 Guatemala, 49, 128 Gulls, 148, 149 Guyana, deforestation, 11 Gygis microrhyncha (tern), 151 Gymnogyps californianus (California condor), 144, 145 Gymnorhina tibicen (Australian magpie), 267 H Habitat loss.   See also specific habitats   biodiversity, 11   birds, 11, 129-130, 142, 144, 154   deforestation, 1-2   extinctions, 61, 142, 144, 154   fragmentation, 11, 102, 135, 143, 146, 375   rates, 86 Habitat monitoring, primate, 345-347 Haemonchus contortus (nematode), 310 Hakalau Forest National Wildlife Refuge, 322 Halcyon sp. (kingfisher), 152, 153, 155 Hamsters, 306, 307-309 Hanta virus, 285-286 Hapalia machaeralis (snout moth), 235 Haptophytes, 111-113, 114 Hargrove, Gene, 380 n.1 Hawaii Biological Survey, 454 Hawaiian honeycreepers, 7, 148 Hawaiian islands, 11, 86, 147, 148, 322, 366, 518 Hawks, 148, 155 Health, human, biodiversity losses and, 285 Hedylepta accepta Butler (sugarcane leafroller), 235 Heliconius sp. (butterfly), 53-54 Heliothis virescens (tobacco budworm), 219 Helminths. See Parasitic helminths Hemiptera, 55, 97 Henderson Island, 149 Henry Greene Prairie, 378-379 Henry, Joseph, 452 Herons, 148, 150, 151, 155 Hesperiidae, 70, 79 Heterotrophs, 111-113, 114, 115 Hinkle, Gregory, 109-122, 514-515 Histoplasmosis, 113 Historical contexts of biodiversity, 509-512

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--> N Nacoleia octasema (snout moth), 235 Names. See Classification of species Nanochlorum eukaryotum (chlorophyte), 118 National Biological Survey (Service), 13, 321, 324, 426, 454-456, 521, 522 National Center for Biotechnology Information (NCBI), 293 National Forum on BioDiversity, 2, 31-32, 296, 341, 389, 404 National Marine Fisheries Service Systematics Laboratory, 366 National Museum of Natural History, Washington, DC, 11, 234, 236, 238, 240, 451, 513, 522. National Oceanic and Atmospheric Administration, 324 National Science Board Task Force on Biodiversity, 89 National Science Foundation, 350, 423, 459 National Wetlands Inventory, 324 National Zoological Park, 342 Natural Heritage Programs, 333 Natural history museums.   See also Inventories;   Research collections   funding, 522-523   history, 449-453   role, 521   types, 448-449 Natural selection, 132 (The) Nature Conservancy, 322, 328, 333, 349 Nearctic realm, 48 Needlefish, 252 Nematoda, 58, 96, 221, 223, 244, 291, 305-308 Nematodirus battus (nematode), 223 Neotropical realm   beetles, 31, 48;   see also Tropical forest beetles   birds, 78   butterflies, 75-76, 77, 78, 79   mammals, 78   moths, 233 Nesoclopeus woodfordi (flightless rail), 149 Nesofregetta fuliginosa (storm petrel), 151 Neurophyseta Hampson (snout moth), 237 New Britain, 142 New Coke, 12 New Guinea, 142, 145, 270 New Ireland, 142 New Mexico   birds, 77   butterflies, 73, 74 New synthesis, 511 New systematics, 508, 511 New York State Museum, 11 New York State Survey, 453, 454 New Zealand, 48, 165 Niger Delta, Mali, 129 Nile River, 130 Nitrogen, use by plants, 189 Nitzschia linearis (diatom), 22 Nomenclature. See Classification of species Nongovernmental organizations, 349.   See also specific organizations North America   birds, 144, 145   climate, 169, 171, 175   east coast, 86, 96   extinctions, 144, 145, 515   floral immigration patterns, 180   forests, 188   insect pests, 220, 223   plants, 165, 171, 175, 176, 179, 180   terrestrial arthropod database, 206 North American Free Trade Agreement, 428 North Carolina Biological Survey, 454 Nuclear-gene-sequence character set assessment   data, 303-305   dopa decarboxylase, 302, 304, 309-313, 316   elongation factor-la, 302, 304 305, 307-309, 311, 313, 315-316, 317-318   elongation factor-2, 302, 306, 311, 313, 315, 316, 317   GAP analysis program, 303   phosphoenolpyruvate carboxykinase, 302, 305, 310, 312, 313-315, 316   phylogenetic analysis, 308-309   RNA polymerase II, 302, 304, 306, 310, 312, 315, 316, 317   selection of sequences, 301-303   test phylogeny, 305-308 Numenius americanus (long-billed curlew), 145 Numenius borealis (Eskimo curlew), 145 Numenius tahitiensis (bristle-thighed curlew ), 146, 152, 153 Nymphalidae, 75, 79 Nymphulinae, 233, 235 Nycticorax sp. (heron), 155

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--> O Oak (Quercus sp.), 54 Oaxala Declaration, 426 Oceania, 147-148, 154 Oceans and seas.   See also Coastal;   Deep sea;   Marine;   Open ocean;   individual oceans and seas   surface area, 88 Octocorals, 364 Oculina arbuscula (coral), 87 Odontiinae, 234 Ohio Biological Survey, 454 Oil extraction, 128 Okavango Swamp, Botswana, 129 Okechobee, Lake, 13 Okhotsk, Sea of, 255 Okinawa, 149 Oklahoma Biological Survey, 454 Oleander, 178 Olson, Storrs, 11 Omiodes Guenee (snout moth), 238 Onchocera volvulus (nematode), 311 Oomycetes, 111-112, 114, 115 Open ocean, bacteria and viruses, 119, 282 Ophyrys sp. (orchids ), 16 Opler, Paul A., 69-82, 514, 520 Opuntia Mill (prickly pear cactus), 235 Oranges, 235 Oregon   butterflies, 73, 74   gap analysis of biodiversity, 322 Orinoco River, 251-252 Ornithologists, 157 Oryctolagus cuniculus (rabbit), 311 Oryza sativa (rice), 293 Ostrinia nubilalis (European corn borer), 223, 235 Owlet-nightjars, 148 Owls, 150 Oysters, 10 Ozone, stratospheric, 192 P Pacific islands, 141, 145, 148, 154 Pacific Ocean, temperatures, 172 Pakistan, 129 Pakitza, Peru, 33, 75, 76 Palau, 87 Palearctic realm, 48 Paleocene epoch, 170-176 Paleocene/Eocene boundary, 176-181, 516 Paleozoic era, 101 Palms, 164, 165 Panama   birds, 78, 142   coral reef taxa, 87, 91   insects, 54, 71-72, 75, 78 Panama Canal, 11 Pantanal Swamp, Brazil, 129-130 Pantoja, Loreto, Peru, 76 Papasula ahhotti (Abbott's booby), 149, 150, 151 Papilionidae, 70, 75, 79 Papua New Guinea, 48, 49, 141, 363-366 Papyrus, 130 Paraguay, 129 Paraguai River, 129-130 Parana River, 251-252, 258 Parasitic helminths   described species, 244   food webs, 249   in freshwater rays, 249, 251-253   historical reconstruction, 239-258   host specificity, 244   in marsupials, 253-254   in pinnipeds, 255-257   in seabirds, 255-257 Parasitic wasps, 220, 222 Parasites.   See also Host-parasite systems   historical probes, 244   of mammals, 113, 223-224 Parrots, 148, 149, 150, 152, 153, 155 Partnership for Enhancing Expertise and Taxonomy, 423 Parus rufescens (chestnut-backed chickadee), 329 Passenger pigeon, 145 Passerherbulus henslouwii (Henslow's sparrow), 146 Passerines, 46, 148 Passifloraceae, 53-54 Patrick, Ruth, 15-24, 213-216, 513, 516-517, 520, 522 Peale, Charles Wilson, 451 Pearl Islands, Panama, 87 Pelicans, 148 Penicillium mold, 9 Pennsylvania Biological Survey, 454 People's Republic of China, 48 Permian/Triassic boundary, 181 Peromyscus sp. (deer mouse), 286

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--> Perspectives on biodiversity.   See also Biodiversity losses   aesthetic/ethical, 8-9, 520   community (natural), 7   concentration of species, 8, 125-126, 257-258, 284   economic, 12-13, 389-404   evolutionary, 7, 9, 109, 243   global/collective, 7-8, 411, 435   services/ecosystem, 9-10, 17-24, 282-284   sustainable development, 389-404 Peru   birds, 141   epidemics, 286   insects, 33, 48, 59, 75-76   Manu National Park, 75-76, 347   potato, 9   primates, 347, 348   Tambopata Reserve, 75, 76 Peterson's field guides, 207, 208 Petrels, 148, 149, 151 Pets, 144 Pew Charitable Trusts, 214 Phaethon lepturus (tropicbird), 151 Phenacoccus manihoti (mealybug), 225 Philadelphia Academy of Natural Sciences, 214, 451 Philippines, 49, 128   birds, 139-140, 141, 145 Phosphates, 13 Photoelectors, 34 Phycitinae, 234, 235, 238 Phyllobrotica sp. (leaf beetle), 226 Phylogeny.   See also Molecular phylogeny   applications, 243   bowerbird, 267   historical reconstructions, 245   host-parasite systems, 247, 248, 257-258, 516   primate, 342-343 Phytoplankton, 89 Picoplankton, photosynthetic marine, 96 Pieridae, 75, 79 Pigeons, 148, 149, 150, 151, 152, 153 Pine trees, 143 Pinus taeda (loblolly pine), 194, 293 Pinnipeds, 247, 516 Piping plover, 146 Pit vipers, 9 Pithecia (saki), 342 Pitta gurneyi (Gurney's pitta), 146 Plankton, marine, 95-96, 286 Planococcus sp. (mealybug), 219-220 Plants   aquatic species, 129   carbon-dioxide, 189-190, 192, 193-194   chemical, 16-17   competitive balance, 189-190, 192, 193-195   defenses, 9, 16-17   drought avoiders, 189-190   endemic species, 130-131   evolution, 115   extinctions, 176-181, 187   fibers, 15   fossils, 164-167, 168, 169, 171, 177-178   fungi ratio, 49-50   global warming effects, 175-181, 187-195, 516   human dependence, 15   introduced species, 194-195   leaf physiognomy, 164-167, 168, 169, 171   losses, 133   lowland, 77   medicines, 9, 84, 134, 279, 280, 284-285   migration, 179-180, 188-189, 516   nearest living relative inferences, 164   number of species, 90, 176, 360   nutrient availability, 190, 193   Paleocene/Eocene boundary, 176-181   pollination and seed dispersal, 16, 157   precipitation, 77   species richness, 180-181   stressful habitats, 190   temperatures, 164, 190   threatened and endangered, 187   ultraviolet radiation increases, 192-194   vegetation mapping, 323-326   water use, 189-192, 193   wetlands, 129-130 Plasmodium faciparum (malaria parasite), 293 Platyhelminthes, 244 Pleistocene epoch, 181, 255-257 Pliocene epoch, 255, 256, 257 Plodia Guenee, 234 Plovers, 153 Plutella xylostella (diamondback moth), 218 Pluvialis dominica (plover), 153 Poaching, 130 Pocillopora damicornis (coral), 87, 91 Podiceps andinus (Colombian grebe), 139 Political ecology, 109, 395

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--> Pollution.   See also specific types of pollution   deforestation, 134   indicator species, 95   marine, 84   regional effects, 11-12 Polychaete worms, 86, 87, 95, 96, 366 Polymerase chain reaction, 13, 118-120, 285 Polynesia, 147, 149, 154 Pomarea iphis (monarch flycatcher), 152 Popillia japonica Newman (Japanese beetle), 218 Population (human)   and extinctions, 157   growth, 12, 83, 84, 154   reduction, 135 Population and Habitat Viability Analysis, 350, 353 Porphyrio sp. (rail), 153, 155 Porzana sp. (flightless rail), 149, 151, 152, 153, 155 Potamotrygonidae, 249, 251-253 Potato, wild, 9 Potomac River, 9, 18, 20, 24 Prairies, restoration, 373, 375-376, 378-379, 381, 384 Precipitation, 77 Preservation   definition, 373   forests, 390   importance, 518   restoration, 372-373   samples, 35   wetlands, 372 Presque Isle State Park, Pennsylvania, 140 Priapocephalus (cetacean), 247 Primary producers, 18 Primates   captive breeding and reintroduction, 351-352, 519   conservation strategies, 344, 349-353, 518-519   education on, 352-353, 519   field studies, 347-349   geographic distribution, 343-345   habitat quantity and quality, 345-347   information management and networking, 349, 518-519   international cooperation, 352   phylogeny, 341-343, 347   publications, 349   systematics, 341-342 Prionodura newtoniana (maypole bowerbird), 266 Prions, 148, 149 Procelsterna cerulea (tern), 151 Prochloron, 96 Project Wallace, 55 Prokaryotes, 90, 118 Prosobonia sp. (sandpiper), 151, 153 Protected areas, 134   marine, 359   reserve network selection, 334-337, 518 Protists, 89, 111, 113, 116-117 Protozoa, 18-22, 90 Pselaphids, 97 Psocoptera, 31 Pteridophora alberti (King-of-Saxon bird of paradise), 272 Pterodroma sp. (petrel), 151 Ptilinopus sp. (pigeons, doves), 151, 153, 155 Ptilonorhynchidae, 266 Ptilonorhynchus violaceus (satin bowerbird), 264, 265, 269-270 Ptiloris paradiseus (paradise riflebird), 267 Pueraria lobata (kudzu), 194 Puerto Rico, deforestation and reforestation, 402-403, 519 Puffinus sp. (shearwater), 151 Pyralidae, 234 Pyraloidea. See Snout moths Pyraustinae, 233, 234, 235, 238 Pyrococcus furiosus, 293 Q Quaternary period, 256, 258 Quick Taxonomic Assessment System (QTES), 33, 36 R Rabbits, 307-309 Rails, 149, 150, 151, 152, 155, 158 Rain forest biodiversity   complexity, 83   coral reefs compared to, 86, 87, 88, 91-93, 100-101, 102-103, 359, 514   described species, 91-93, 102   distribution, 71   economics, 391   extinctions, 62, 63   importance, 86   insects, 71-72, 87, 91

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--> Rain forests   burning, 86   surface area, 88, 93 Rallus sp. (light-footed clapper rail), 377 Rapid Assessment Program Team, 31, 349 Rapid gene discovery.   See also Expressed Sequence Tags   applications to biodiversity, 295-296   Phylogenetic Species Tags, 296   process, 289-291 Rats, 305-309 Rattus norvegicus (Norway rat), 310, 311 Raven, Peter, 214 Rays, freshwater, 249, 251-253 Reaka-Kudla, Marjorie L., 83-108, 507-523 Recreation, 84 Red Data Books, 45-46, 60, 61, 63 Red-cockaded woodpecker, 145-146 Red-headed woodpecker, 146 Red maple, 192 Reforestation, 390, 402-404 Refugial habitats, 256 Regier, Jerome C., 301 320, 516, 518 Reintroduction of captive species, 343, 348, 351-352, 519 Relictual communities, 248, 253 Reptiles, 78 Research collections   living, 467-470, 521   use, 456-459 Resmethrin, 33-34 Restoration. See Ecological restoration Rhode Island, butterflies, 73, 74 Rhode Island Natural History Survey, 45 , 454 Rhodophytes, 111-113, 115 Rhynchosciara americana (fly), 311 Ribosomal RNA Database Project, 111 Ribosomal RNA (rRNA) sequence analysis, 110-112, 114, 116-117, 118, 119 Rice, 223, 234, 235 Rieger, John, 377 Rift Valley, 127 Rio Grande Valley, butterflies, 74 Rio Madeira drainage area, 76, 79 Rio Napo, 76 Rio Solimòes, 76, 79 Riodinidae, 79 Riparian habitats, 11, 33 Riverine systems.   See also Freshwater ecosystems   degradation and losses, 126   energy-nutrient transfers, 17-24 Robbins, Robert K., 69-82, 513, 514, 520 Robins, 155 Roblin, Richard O., 467-474, 521 Rodents, 285 Rondonia, 11 Roper, Clyde, 366 Rossman, Amy Y., 217-229, 475-490, 514, 517, 518, 520, 521 Rotenone, 87 Royal Entomological Society of London, 55 S Sabrosky, Curtis W., 206, 508 Saccharomyces cerevisiae (baker's yeast), 291, 293 Saimiri (squirrel monkey), 342 Saguinus sp. (tamarin), 342 Saint Colman, 510-511 Saint Brendan, 510 Saint Kevin of Ireland, 509-510 Salinization, 13 Salmon River estuary, 378 Salvinia preauriculata (aquatic fern), 178 Samoa, 149 Sample preparation   bar-code labels, 2-36   beetles, 35-36 Sampaio, Maria, 342 Sampling   beetles, 33-35, 37-38   training in, 215   fish, 87   rates, 37-38 San Antonio cloud forest, 146 San Blas Islands, Panama, 95 San Diego State University, 377 Sandhill crane, 145 Sandpipers, 148, 151, 152, 153 Santa Rosalia, 507-509 São Paulo, 8, 10 Satellite remote sensing, 321, 324-326, 345-347, 518 Savannah River, 18, 21, 24 Scenopoeetes dentirostris (toothbilled bowerbirds), 266-267, 271-272, 274 Schizophyllum commune (ant), 117 Schneider, Horácio, 342 Schoenobiinae, 235

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--> Scientific Committee on Problems of the Environment, 436 Scientific method, 350, 357, 518-519 Scirpophaga incertulas (rice moth), 235 Scleractinian corals, 364 Sclerospongia, 284-285 Scopariinae, 234 Scott, J. Michael, 321-340, 514, 518, 520, 521 Scutellaria sp., 226 Sea lions, 256 Sea urchins, 84 Sedge wren, 146 Sedimentation, 84, 127, 128 Sediments, marine, 94-95 Seeds, defensive compounds, 16 Sequences, Sources, Taxa (SST) database, 294-295 Sericomyrmex sp. (ant), 116, 117 Serra do Japi Reserve, 76 Seychelles, 87 Sharks, 95 Shearwaters, 149, 151 Sheep, pathogenic parasites, 223-224 Shrimps and prawns, 13, 87, 97, 98, 99, 307-309 Silent Spring, 218 Size of population (nonhuman), and vulnerability, 139, 147, 518 Size of species   coral reefs, 97-100, 102-103, 514, 519   eukaryote/prokaryote differentiation, 118   extinction rates, 101, 103, 514   geographic distribution, 98-100, 101-102   vulnerability, 348-349 Smithsonian Institution, 3, 8, 95, 214, 342, 451, 452, 513, 522.   See also National Museum of Natural History Smut, 222-223, 517 Snakes, venom, 9 Snout moths (Pyraloidea)   and agriculture, 234-235, 517   benefits of research, 239-240   biodiversity studies, 234, 515   caterpillars, 233   in Costa Rica, 232, 233, 235-239   families and subfamilies, 232, 234   geographic distribution, 232-233   identification aids, 238-239   number of species, 232   response to environmental disturbance, 233-234 Society Islands, 149 Society of Systematic Zoologists, 508 Sogin, Mitchell L., 109-122, 508, 514-515 Soil   bacteria, 283   biology, 8   moisture, 192 Solis, M. Alma, 231-242, 513, 515, 517, 520 Solomon Islands, 141, 142, 149, 515 Soulé, Michael, 132 South Africa, insects, 48, 49, 54 South America   birds, 142, 144, 146   extinctions, 144   insects, 225 South Carolina   birds, 77   butterflies, 73 Soviet Union (former), insects, 48, 49 Soybeans, 222 Speciation, 58, 126, 127, 132 Species   adaptation, 100-101, 115, 131, 132, 149, 158   definition, 216   discovery rates, 158   distribution and biology, 45-47, 48-49   distribution maps, 326-328   morphospecies concept, 59-60, 95-96   turnover, 58-59, 147, 182 Species, number.   See also Classification of species;   Measurement of biodiversity   aquatic, 89, 90   beta diversity, 58-59   body size, 56, 57-58   concentration, 8   coral reefs, 85-94, 102, 514   estimated, 7, 8, 45, 55-57, 65, 85-86, 91-93, 244, 360, 514   fungi, 90, 282   insects, 29, 32, 55-56, 90, 232, 513-514   marine, 86, 89, 101   microbial, 282   named and described, 42, 45, 85, 89, 90, 91, 102   rain forests, 102, 514   riverine systems, 17   Sulawesi, 55-57   symbiotic, 89, 90   taxa, 57, 90   terrestrial, 89, 90, 96-97, 101 Species losses. See Extinction

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--> Species Survival Commission, 351-352 Spermophilus brunneus (ground squirrel), 330 Spiders, 96-97 Sponges, 87, 94, 284-285 Sri Lanka, 130-131 Staphylinids, 36, 97 Starlings, 156 State Heritage Program, 454 Steadman, David, 11, 139-161, 515 Steinernema carpocapsae (nematode), 221 Stephen Island wren, 11 Sterna sp. (tern), 151 Stingrays, 249, 251-253, 516 Stoneflies, 18 Stork, Nigel E., 41-68, 97, 99, 514, 515 Storm-petrels, 149, 151 Stramenopile assemblage, 111-114 Strigid owls, 148 Stroud Water Research Laboratory, 18 Subsidies, economic, 134-135, 395 Sudan, 129, 130 Sudd Swamp, Sudan, 129, 130 Sugarcane, 234, 235 Sula sp. (booby), 149, 151 Sulawesi, Indonesia, 52, 55-57, 233-234 Surgeonfish, 116-117, 118 Surinam, deforestation, 11 Surirella ovala (diatom), 22 Surveys, biodiversity.   See also Gap analysis   breeding bird, 326   marine, 359-360   state natural history, 454   wetlands, 324 Sus scrofa (pig), 310 Sustainable development/management, 13   agriculture, 221-222, 399-400, 401-402, 519   Amazonia, 400-401   biodiversity, 390   coral reefs, 84   biosphere initiative, 390   definition, 389-390, 519   extractive reserves, 395   Ford village industry concept, 397, 519   forests, 390-391, 402-403, 519   historical lessons, 396-404   impediments to, 394-396   international cooperation, 426, 519   Maya civilization collapse, 396-397, 519   McKelvey box classification, 391-394   nontimber product marketing, 399, 519   political backlash, 395-396   political/economic dichotomies, 397-398, 519   transportation-development partnerships, 398-399, 519   tropical, 389-404   ''use it or lose it" approach, 390-391, 413-414   women's role, 400 Sutton, Granger, 289-299, 518, 521 Swallow-tailed kite, 145 Swans, 148 Sweeney, Mike, 366 Sweet potato whitefly, 220 Swifts, 152, 155 SwissProt database, 290 Symbiotic organisms, 89, 90, 116-118 Systema Naturae, 42, 204, 208, 508 Systematic biology, 108-109 Systematic Entomology Laboratory (USDA), 3, 206, 207, 219, 513 Systematic Zoology, 508 Systematics Agenda 2000, 61, 96, 226-227, 437, 440-442, 444-445, 521-522 Systematists and systematics, 85.   See also Classification of species   agricultural, 219-220, 222-226, 517   components, 436   ecological approach, 437-440, 520   education and training, 157, 213-216, 239-240, 360, 423, 443-444, 516-517, 521-522, 523   institutional infrastructure, 521-522   interinstitutional links, 522   molecular approaches, 157, 291-295;   see also Molecular phylogeny   need, 436-437, 511, 517, 520-521   predictive nature, 200-201, 202, 225-226   primate, 341-342   resources, 204, 224-225, 511, 512   status, 460-462 T Tambopata Reserve, Peru, 75, 76 Tanganyika, 127, 128 Tangatatau Rockshelter, 150, 153 Tanimbar, 142 Tapeworms, 247, 253-254, 516 Tarahumara, 143 Taxon, 205 Taxonomic Working Group (TWIG), 35, 38

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--> Taxonomists, need for, 44, 94 Taxonomy.   See also Classification of species   coral reef biodiversity, 360   morphospecies concept, 59-60   number of taxonomists, 360   wildland biodiversity management, 422-424 Teak, 235 Temperatures, environmental.   See also Global climate change   plant response, 164, 189, 194-195 Tepuis, 142 Termites, 31 Terns, 149, 151 Terpenoids, 16 Tertiary period, 249, 251, 253-254 Tethys Sea, 179 Tetrodotoxin, 284 Tretrabothrius (cetacean), 247 Tetraphyllidean cestodes, 249 Texas, butterflies, 73, 74 Thailand, birds, 146 Thanatephorus praticolo (ant), 117 The Institute for Genomic research (TIGR), 290 Thermus aquaticus (bacteria), 285 Thomas, James D., 357-369, 514, 519, 520 Thompson, F. Christian, 199-211, 517, 518, 519 Thoreau, Henry David, 383 Threatened and endangered species   birds, 149, 154, 323   freshwater ecosystems, 126   gap analysis and, 328, 518   insects, 46-47   knowledge base, 45 47, 101   morphospecies concept, 95   plants, 187, 379   and relative rates of extinction, 60-61, 64 Thrushes, 155 Tierra del Fuego, 8 Tilletia sp. (smut), 223 Tirathaba complexa (coconut moth), 235 Tolgren extractor techniques, 34 Tomato, 224 Tonga, 147, 149, 152, 154, 155-156 Toxins and detoxins, 16-17 Toxostoma redivivum (California thrashers), 328 Trachymyrmex sp. (ant), 116, 117 Trapping, insects, 34 Trees   carbon dioxide uptake, 12   number of species, 51, 53, 55-56, 79   tropical forest, 51, 53 Trichoderma sp., 226 Trichogramma sp., 222, 227 Trichomonads, 111 Trigonocotyle, 247 Trillers, 155 Triticum aestivum, 193, 194 Tropical coastal zone, 88-89, 92 Tropical forest beetles   collection-building, 37   collection of data, 32-33   host specific, 51-53   insecticidal fogging method, 30, 50   interim identification, 37   number of species, 28, 51, 54, 59   preparation, 35-36   sampling, 33-35   species-level studies, 30   storage of data, 37 Tropical forests   beetles, see Tropical forest beetles   birds, 140   canopy, 8, 50, 79   deforestation, 1-2, 11, 133, 135, 140   dry, 74   fragmentation, 146, 375-376   hydrological cycle, 10   insects, 27, 74   nontimber products, 390, 391, 394-395, 399   protected areas, 134   species, 8, 27, 51, 53, 91-93, 359   sustainable use, 390-391, 519 Tropical lakes, 126-128 Tropical wetlands, 128-131 Tropicbirds, 149, 151 Trumpeter swan, 145 Tsuga canadensis (Eastern hemlock), 188-189 Tunicates, 284 Turdus poliocephalus (thrush), 155 Turkey, 131 Turner, Frederick, 380, 383 Turner, Victor, 384-386 Tyto alba (barn owl), 155 U Ua Huka, 149, 150, 151-152 Ucayali, Peru, 76 Uganda, 220 Ulmus (Chaetoptelea) microphylla, 177 Ultraviolet radiation, 84, 134, 192-194, 283

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--> Umminger, Bruce L., 491-504, 518, 521, 522 Unaspis euonymi (euonymus scale), 221 United Kingdom   extinction rates, 64, 76-77   insect fauna, 7, 54, 69   threatened species, 46, 64 United Nations Educational, Scientific, and Cultural Organization, 324, 416-417, 436 United States   agriculture, 220, 222-223, 517, 519   biotechnology industry, 280- 281   birds, 77, 143, 154   butterflies, 72-74   Civil War, 397-398, 519   conservation strategy, 333   extinctions, 126, 143   habitat losses, 154   insects, 48, 49, 72-74, 220, 222-223   plant species, 129   riverine systems, 126, 515   threatened and endangered species, 126   wetlands, 129 University of Kansas, 214 University of Maryland   Biotechnology Institute, 3, 513   College Park, 3, 219, 513 University of Wisconsin   Genetics Computer Group, 303   Madison Arboretum, 378-379, 381-382, 384 Ursus americanus (black bear), 329 Usumacinta Delta, Mexico, 129 U.S. Biological Survey, 13 U.S. Department of Agriculture   Animal and Plant Health Inspection Service (APHIS), 222-223, 517   Systematics Laboratories, 3, 206, 207, 219, 513 U.S. Environmental Protection Agency, 324, 326 U.S. Fish and Wildlife Service, 322, 326 U.S. Geological Survey, 324 U.S. National Biodiversity Information Center, 491-497, 498-503, 521, 522 Utah, gap analysis of biodiversity, 322 V Vanilla, 12 Venezuela, 76, 141 Venter, J. Craig, 289-299, 518 Vermivora bachmanii (Bachman's warbler), 145 Vertebrates   knowledge of biodiversity of, 7-8   number of species, 360 Vestimentifera, 94-95 Vibrio cholerae 01, 286 Victoria, Lake, 127-128 Vini sp. (parrot), 152, 153, 155 Vireo bellii (least Bell's vireo), 379 Virginia, butterflies, 73, 74 Viruses and procaryotes, 89, 90, 96, 282 W Walker, Francis, 44 Wallace, Alfred, 357, 508 Warblers, 146, 152, 153, 155 Wars and conflicts, and conservation, 396 Washington, George, 402 Washington state, butterflies, 73, 74 Wasps (Chalcidoidea), diversity, 53, 97 Water boatmen (Corixidae), 509 Water hyacinth, 235 Water pollution, 13, 126, 127 Water supply projects, 13 Water use, by plants, 189, 192 Weather, extreme events, 188;   see also Global climate change Weeds, biocontrol, 234-235, 517 Weevils, 35, 36 Western red cedar, 332 Wetlands.   See also specific wetlands   birds, 140   losses, 128-129, 139   mapping, 324   restoration, 372, 377-378   threats, 129   tropical, 128-131 Whales, 133 Wheat, 131, 193, 194, 222-223, 517 Wheeler, Quentin D., 435-446, 517, 520-521, 522 Whistlers, 155 White Clay Creek, Pennsylvania, 18, 22-23, 517 White, Owen, 289-299, 518, 521 White-eyes, 156 Whiteflies, 220 White Mountains, New Hampshire, 189 Whooping crane, 145 Wilcox, Bruce, 132 Williams, Austin, 366 Willis, Ed, 11

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--> Wilson, Don E., 507-523 Wilson, Edward O., 1-3, 28, 214, 296, 449, 507-523 Wing, Scott L., 163-185, 516 World Bank, 395 World Conservation Monitoring Centre, 498 World Conservation Union, 63, 351 World Wildlife Fund, 349 Wyoming   birds, 77   butterflies, 73 X Xenopus laetis (frog), 311 Xerocomus chrysenteron (ant), 117 Y Yellowstone National Park, 13, 119, 285 Young, Steve, 491-504, 518, 521, 522 Z Zaire, 48 Zambia, 129 Zea mays (maize), 293 Zedler, Joy, 377 Zooarcheology, island birds, 147-153 Zoos. See Captive breeding;   specific institutions Zosteropidae sp. (white-eyes), 156

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Representative terms from entire chapter:

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