References

AFPA (American Forest and Paper Association). 2007. U.S. Forest Products Industry: Competitive Challenges in a Global Marketplace. Accessed on September 19, 2007 at http://policycouncil.nationaljournal.com/EN/Forums/American+Forest++Paper+Association/1f7d98e5-d352-45be-8ec6-0d335ee9a4f7.htm.

AMS (U.S. Department of Agriculture, Agricultural Marketing Service). 2007. The National Organic Program. Accessed on October 5, 2007 at http://www.ams.usda.gov/NOP/NOP/NOPhome.html.

ARS (U.S. Department of Agriculture, Agricultural Research Service). 2005. National Plant Germplasm System. Accessed on August 13, 2007 at http://www.ars-grin.gov/npgs/index.html.

Baran S.B., C.J. Lawrence, and V. Brendel. 2004. Plant genome research outreach portal: a gateway to plant genome research “outreach” programs and activities. Plant Physiology 134:889.

Bialek, W., and D. Botstein. 2004. Introductory science and mathematics education for 21st-century biologists. Science 303:788–790.

Boyer, J.S. 1982. Plant productivity and environment. Science 218:443–448.

Broad Institute. 2007. Fungal Genome Initiative. Accessed on November 16, 2007 at http://www.broad.mit.edu/annotation/fgi/.

Brown, G.R., G.P. Gill, R.J. Kuntz, C.H. Langley, and D.B. Neale. 2004. Nucleotide diversity and linkage disequilibrium in loblolly pine. Proceedings of the National Academy of Sciences USA 101:15255–15260.

Brueggeman, R., N. Rostoks, D. Kudrna, A. Kilian, F. Han, J. Chen, A. Druka, B. Steffenson, and A. Kleinhofs. 2002. The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases. Proceedings of the National Academy of Sciences USA 99:9328–9333.

Brunner, A.M., V.B. Busov, and S.H. Strauss. 2004. Poplar genome sequence: functional genomics in an ecologically dominant plant species. Trends in Plant Science 9:49–56.

Calhill, D.J., and D.H Schmidt. 2004. Use of DNA marker assisted selection in a product development breeding program. In Proceedings of the 4th International Crop Science Conference, 26 Sept.–1 Oct. 2004. Brisbane, Australia. Available at http://www.cropscience.org.au/icsc2004/symposia/3/4/133_schmidtdh.htm#TopOfPage.

Campbell, A.M., and L.J. Heyer. 2007. Discovering Genomics, Proteomics, and Bioinformatics. 2nd ed. San Francisco: Benjamin Cummings.

Campbell, A.M., M.L. Ledbetter, L.L. Hoopes, T.T. Eckdahl, L.J. Heyer, A. Rosenwald, E. Fowlks, S. Tonidandel, B. Bucholtz, and G. Gottfried. 2007. Genome consortium for active teaching: meeting the goals of BIO2010. CBE—Life Sciences Education 6:109–118.



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References AFPA (American Forest and Paper Association). 2007. U.S. Forest Products Industry: Competitive Challenges in a Global Marketplace. Accessed on September 19, 2007 at http://policycouncil.nationaljournal.com/EN/ Forums/American+Forest++Paper+Association/fde-d-be-ec-0deeaf.htm. AMS (U.S. Department of Agriculture, Agricultural Marketing Service). 2007. The National Organic Program. Accessed on October 5, 2007 at http://www.ams.usda.gov/NOP/NOP/NOPhome.html. ARS (U.S. Department of Agriculture, Agricultural Research Service). 2005. National Plant Germplasm System. Accessed on August 13, 2007 at http://www.ars-grin.gov/npgs/index.html. Baran S.B., C.J. Lawrence, and V. Brendel. 2004. Plant genome research outreach portal: a gateway to plant genome research “outreach” programs and activities. Plant Physiology 134:889. Bialek, W., and D. Botstein. 2004. Introductory science and mathematics education for 21st-century biologists. Science 303:788–790. Boyer, J.S. 1982. Plant productivity and environment. Science 218:443–448. Broad Institute. 2007. Fungal Genome Initiative. Accessed on November 16, 2007 at http://www.broad.mit.edu/ annotation/fgi/. Brown, G.R., G.P. Gill, R.J. Kuntz, C.H. Langley, and D.B. Neale. 2004. Nucleotide diversity and linkage disequi- librium in loblolly pine. Proceedings of the National Academy of Sciences USA 101:15255–15260. Brueggeman, R., N. Rostoks, D. Kudrna, A. Kilian, F. Han, J. Chen, A. Druka, B. Steffenson, and A. Kleinhofs. 2002. The barley stem rust-resistance gene Rpg1 is a novel disease-resistance gene with homology to receptor kinases. Proceedings of the National Academy of Sciences USA 99:9328–9333. Brunner, A.M., V.B. Busov, and S.H. Strauss. 2004. Poplar genome sequence: functional genomics in an ecologi- cally dominant plant species. Trends in Plant Science 9:49–56. Calhill, D.J., and D.H Schmidt. 2004. Use of DNA marker assisted selection in a product development breeding program. In Proceedings of the th International Crop Science Conference, 26 Sept.–1 Oct. 2004. Brisbane, Australia. Available at http://www.cropscience.org.au/icsc00/symposia///_schmidtdh.htm#TopOfPage. Campbell, A.M., and L.J. Heyer. 2007. Discovering Genomics, Proteomics, and Bioinformatics. 2nd ed. San Francisco: Benjamin Cummings. Campbell, A.M., M.L. Ledbetter, L.L. Hoopes, T.T. Eckdahl, L.J. Heyer, A. Rosenwald, E. Fowlks, S. Tonidandel, B. Bucholtz, and G. Gottfried. 2007. Genome consortium for active teaching: meeting the goals of BIO2010. CBE—Life Sciences Education 6:109–118. 

OCR for page 115
achievements n at i o na l P l a n t g e n o m e i n i t i at i v e  of the Carleton College. 2007. Teaching Big Science at Small Colleges: A Genomics Collaboration. Accessed on August 23, 2007 at http://serc.carleton.edu/genomics/index.html. CGIAR (Consultative Group on International Agricultural Research) Genomics Task Force. 2006. Enhancing the delivery of genomics research outcomes. Accessed on October 30, 2007 at http://www.sciencecouncil.cgiar. org/meetings/meeting/SC/SC%0Item%0%0Genomics.pdf. Chapple, C., M. Ladisch, and R. Meilan. 2007. Loosening lignin’s grip on biofuel production. Nature Biotechnology 25:746–748. Check, E. 2003. Harvard heralds fresh take on systems biology. Nature Biotechnology 425:439. Clark, R.M., G. Schweikert, C. Toomajian, S. Ossowski, G. zeller, P. Shinn, N. Warthmann, T.T. Hu, G. Fu, D.A. Hinds, H. Chen, K.A. Frazer, D.H. Huson, B. Scholkopf, M. Nordborg, G. Ratsch, J.R. Ecker, and D. Weigel. 2007. Common sequence polymorphisms shaping genetic diversity in Arabidopsis thaliana. Science 317:338–342. Cornell University. 2005. Public Seed Initiative. Accessed on October 5, 2007 at http://www.plbr.cornell.edu/psi/ index.html. Davidson College. 2005. Genome Consortium for Active Teaching (GCAT). Accessed on August 10, 2005 at http://www.bio.davidson.edu/projects/gcat/gcat.html. Delmer, D.P. 2005. Agriculture in the developing world: connecting innovations in plant research to downstream applications. Proceedings of the National Academy of Sciences USA 102:15739–15746. Distelfeld, A., C. Uauy, T. Fahima, and J. Dubcovsky. 2006. Physical map of the wheat high-grain protein content gene Gpc-B1 and development of a high-throughput molecular marker. New Phytologist 169:753–763. DOE (U.S. Department of Energy). 2005a. Energy and environmental profile of the pulp and paper industry. Accessed on September 19, 2007 at http://www.eere.energy.gov/industry/forest/pdfs/pulppaper_profile.pdf. ———. 2005b. Systems biology for energy and environment. In DOE Genomics: GTL Roadmap: U.S. Department of Energy Office of Science. Accessed on October 30, 2007 at http://genomicsgtl.energy.gov/roadmap/pdf/ GenomicsGTL_Roadmap_lowres.pdf. ———. 2006. Breaking the Biological Barrier to Cellulosic Ethanol: A Joint Research Agenda, DOE/SC-0095, U.S. Department of Energy Office of Science of Energy Efficiency and Renewable Energy. Accessed on September 19, 2007 at http://genomicsgtl.energy.gov/biofuels/00workshop/bblowres00.pdf. ———. 2007a. Plant Feedstocks Genomics for Bioenergy. Accessed on October 22, 2007 at http://genomicsgtl. energy.gov/research/DOEUSDA/index.shtml. ———. 2007b. Community Sequencing Plans. Accessed on July 31, 2007 at http://www.jgi.doe.gov/sequencing/ seqplans.html. Dolan, E.L., B.E. Soots, P.G. Lemaux, S.Y. Rhee, and L. Reiser. 2004. Strategies for avoiding reinventing the precol- lege education and outreach wheel. Genetics 166:1601–1609. Doty, S.L., T.Q. Shang, A.M. Wilson, J. Tangen, A.D. Westergreen, L.A. Newman, S.E. Strand, and M.P. Gordon. 2000. Enhanced metabolism of halogenated hydrocarbons in transgenic plants containing mammalian cytochrome P450 2E1. Proceedings of the National Academy of Sciences USA 97:6287–6291. Dyer, B.D., and M.D. LeBlanc. 2002. Meeting report: incorporating genomics research into undergraduate cur- ricula. Cell Biology Education 1:101–104. Easterling, W.E., P.K. Aggarwal, P. Batima, K.M. Brander, L. Erda, S.M. Howden, A. Kirilenko, J. Morton, J-F. Soussan, J. Schmidhuber, and F.N. Tubiello. 2007. Food, fiber, and forest products. In Climate Change 00: Impacts, Adaptation and Vulnerability. Contribution of Working Group II to the Fourth Assessment of the In- tergovernmental Panel on Climate Change, edited by M.L. Parry, O.F. Canziani, J.P. Palutikof, P.J.v.d. Linden, and C.E. Hanson. Cambridge: Cambridge University Press. Endy, D. 2005. Foundations for engineering biology. Nature 438:449–453. ERS (U.S. Department of Agriculture, Economic Research Service). 2006. Forest Land. Accessed on October 30, 2007 at http://www.ers.usda.gov/Data/MajorLandUses/glossary.htm#forest. ERS (U.S. Department of Agriculture, Economic Research Service). 2007. U.S. Agricultural Projections to 2016. Accessed on November 16, 2007 at http://www.ers.usda.gov/publications/oce0/oce00.pdf. European Commission. 2006. EU-SOL - High Quality Solanaceous Crops for Consumers, Processors and Pro- ducers by Exploration of Natural Biodiversity. Accessed on August 24, 2007 at http://www.eu-sol.net.

OCR for page 115
references  FAOSTAT. 2007. Core database of the Food and Agriculture Organization of the United Nations. Accessed on May 23, 2007 at http://faostat.fao.org/default.aspx. Fernandez-Cornejo, J, and M. Caswell. 2006. The First Decade of Genetically-Engineered Crops in the United States. U.S. Department of Agriculture Economic Research Service, April 2006. Available from http://www.ers.usda. gov/publications/eib/eib.pdf. Fu, D., P. Szucs, L. Yan, M. Helguera, J.S. Skinner, J. von zitzewitz, P.M. Hayes, and J. Dubcovsky. 2005. Large deletions within the first intron in VRN-1 are associated with spring growth habit in barley and wheat. Molecular Genetics and Genomics 273:54–65. Gafney, L. 2001. The impact of research on undergraduates’ understanding of science. Council on Undergraduate Research Quarterly 21:172–176. Gerstein, M., D. Greenbaum, K. Cheung, and P. L. Miller. 2007. An interdepartmental Ph.D. program in compu- tational biology and bioinformatics: the Yale perspective. Journal of Biomedical Informatics 40(1):73–79. GMOD (Generic Model Organism Database). 2007. GMOD Home Page. Accessed on September 20, 2007 at http://gmod.org/. Goff, S.A., and H.J. Klee. 2006. Plant volatile compounds: sensory cues for health and nutritional value? Science 311:815–819. Gramene. 2007. RiceCyc Home and Biochemical Pathways. Accessed on September 28, 2007 at http://www. gramene.org/pathway/. Handelsman, J., C. Pfund, S. Miller Lauffer, and C. Pribbenow. 2005. Entering Mentoring: A Seminar to Train a New Generation of Scientists. Madison: University of Wisconsin Press. HHMI (Howard Hughes Medical Institute). 2007. HHMI pilots a “SEA” change: Experimental course to bring genomics teaching and research to undergraduates across the nation. Accessed on August 23, 2007 at http:// www.hhmi.org/bulletin/aug00/chronicle/sea.html. Honts, J.E. 2003. Evolving strategies for the incorporation of bioinformatics within the undergraduate cell biology curriculum. Cell Biology Education 2(4):233–247. Hossain, F., B. Onyango, B. Schiling, and W. Hallman. 2003. Public perceptions of biotechnology and acceptance of genetically modified food. Journal of Food Distribution Research 4:36–50. Huang, J., R. Hu, S. Rozelle, and C. Pray. 2005. Insect-resistant GM rice in farmers’ fields: assessing productivity and health effects in China. Science 308 (5722):688–690. Huang, J., S. Rozelle, C. Pray, and Q. Wang. 2002. Plant biotechnology in China. Science 295(5555):674–676. Hunter, A.-B., S.L. Laursen, and E. Seymour. 2006. Becoming a scientist: the role of undergraduate research in students’ cognitive, personal, and professional development. Science Education 91:36–74. Ideker, T. 2004. Systems biology 101–what you need to know. Nature Biotechnology 22:473–475. IRFGC (International Rice Functional Genomics Consortium). 2007. Web 2.0 Portal. Accessed on August 9, 2007 at http://www.iris.irri.org:00/IRFGC/. IRGSP (International Rice Genome Sequencing Project). 2002. Completion of the rice genome sequence an- nounced. Accessed on October 30, 2007 at http://rgp.dna.affrc.go.jp/E/IRGSP/Dec_NEWS.html. Jacke, D. 2005. Edible Forest Gardens: Ecological Vision and Theory for Temperate Climate Permaculture. White River Junction, VT: Chelsea Green Publishing. JGI (U.S. Department of Energy, Joint Genome Institute). 2006. Energy-rich Portfolio of New Genome Sequencing Targets for DOE JGI. Accessed on August 10, 2007 at http://www.jgi.doe.gov/News/news___0.html. Johnson, G.R., N.C. Wheeler, and S.S. Strauss. 2000. Financial feasibility of marker-aided selection in Douglas-fir. Canadian Journal of Forest Research 30:1942–1952. Kim, S., V. Plagnol, T.T. Hu, C. Toomajian, R.M. Clark, S. Ossowski, J.R. Ecker, D. Weigel, and M. Nordborg. 2007. Recombination and linkage disequilibrium in Arabidopsis thaliana. Nature Genetics 39(9):1151–1155. Labov, J. 2006. Education at the National Academies: three recent reports on improving science education. Cell Biology Education 5:12–18. Laursen, S., C. Liston, H. Thiry, and J. Graf. 2007. What good is a scientist in the classroom? Participant outcomes and a program design features for a short-duration science outreach intervention in K-12 classrooms. Cell Biology Education 6:49–64. Lopatto, D. 2003. The essential features of undergraduate research. Council on Undergraduate Education Quarterly 23:139–142.

OCR for page 115
achievements n at i o na l P l a n t g e n o m e i n i t i at i v e  of the ———. 2004. Survey of undergraduate research experiences (SURE): first findings. Cell Biology Education 3:270–277. Meyerowitz, E., and S.Y. Rhee. 2006. Report of the NSF Workshop for a Plant Cyberinfrastructure Center. October 17–18, 2005. Accessed on August 10, 2007 at http://www.nsf.gov/pubs/reports/plant_cyberin_report_000. pdf. Mollison, B. 1988. Permaculture: A Designer’s Manual. Tyalgum, Australia: Tagari Publications. NASS (U.S. Department of Agriculture, National Agricultural Statistics Service). 2007a. Prospective Plantings. Accessed on September 19, 2007 at http://usda.mannlib.cornell.edu/usda/current/ProsPlan/ProsPlan-0-0- 00.pdf. ———. 2007b. Crop values 2006 summary. Accessed on September 19, 2007 at http://usda.mannlib.cornell.edu/ usda/current/CropValuSu/CropValuSu-0--00.pdf. ———. 2007c. USDA National Agricultural Statistics Service - Quick Stats. Accessed on November 16, 2007 at http://www.nass.usda.gov/QuickStats/Create_Federal_All.jsp. Neale, D.B., and O. Savolainen. 2004. Association genetics of complex traits in conifers. Trends in Plant Science 9:325–330. NHGRI (National Human Genome Research Institute). 2007. ELSI Planning and Evaluation History. Accessed on October 5, 2007 at http://www.genome.gov/000. NRC (National Research Council). 2002. The National Plant Genome Initiative: Objectives for 00–00. Wash- ington, DC: The National Academies Press. ———. 2003. BIO 00. Transforming Undergraduate Education for Future Research Biologists. Washington, DC: The National Academies Press. ———. 2005a. Review of the Department of Energy’s Genomics: GTL Program. Washington, DC: The National Academies Press. ———. 2005b. America’s Lab Report: Investigations in High School Science. Washington, DC: The National Acad- emies Press. ———. 2007a. The New Science of Metagenomics. Revealing the Secrets of Our Microbial Planet. Washington, DC: The National Academies Press. ———. 2007b. Rising Above the Gathering Storm. Washington, DC: The National Academies Press. NSF (National Science Foundation). 2006. REU Sites: Biological Sciences. Accessed on August 10, 2007 at http:// www.nsf.gov/crssprgm/reu/list_result.cfm?unitid=0. ———. 2007a. 2010 Project. Accessed on November 14, 2007 at http://www.nsf.gov/funding/pgm_summ.jsp?pims_ id=&org=BIO&sel_org=BIO&from=fund. ———. 2007b. Developing Country Collaborations in Plant Genome Research (DCC-PGR). Accessed on August 1, 2007 at http://www.nsf.gov/pubs/00/nsf0.htm. ———. 2007c. NSF Awards Made to Support the Construction of BAC Libraries. Accessed on October 5, 2007 at http://www.nsf.gov/bio/pubs/awards/bachome.htm. NSTC (National Science and Technology Council). 1998. National Plant Genome Initiative. Washington, DC: National Science and Technology Council. ———. 1999. National Plant Genome Initiative: Progress Report October 1999. Washington, DC: National Sci- ence and Technology Council. ———. 2000. National Plant Genome Initiative: Progress Report November 2000. Washington, DC: National Science and Technology Council. ———. 2001. National Plant Genome Initiative: Progress Report December 2001. Washington, DC: National Science and Technology Council ———. 2003. National Plant Genome Initiative: 2003–2008. Washington, DC: National Science and Technology Council ———. 2004. National Plant Genome Initiative: Progress Report January 2004. Washington, DC: National Sci- ence and Technology Council ———. 2005. National Plant Genome Initiative: Progress Report January 2005. Washington, DC: National Sci- ence and Technology Council ———. 2006. National Plant Genome Initiative: Progress Report January 2006. Washington, DC: National Sci- ence and Technology Council

OCR for page 115
references  ———. 2007. National Plant Genome Initiative: Progress Report January 2007. Washington, DC: National Sci- ence and Technology Council. Pevzner, P.A. 2004. Educating biologists in the 21st century: bioinformatics scientists versus bioinformatics techni- cians. Bioinformatics 20:2159–2161. Pfund, C., C. Maidl Pribbenow, J. Branchaw, S. Miller Lauffer, and J. Handelsman. 2006. Professional skills: the merits of training mentors. Science 311:473–474. PGROP (Plant Genome Research Outreach Portal). 2006. Plant Genome Research Outreach Portal. Accessed on August 12, 2007 at http://plantgdb.org/PGROP/pgrop.php. Plant Genome Database. 2007. Resources for Comparative Genomics. Accessed on September 20, 2007 at http:// www.plantgdb.org/prj/ESTCluster/progress.php. Qaim, M., and D. zilberman. 2003. Yield effects of genetically modified crops in developing countries. Science 299:900–902. Raboy, V. 2007. The ABCs of low-phytate crops. Nature Biotechnology 25:874–875. Reddy, K.R., and H.F. Hodges. (eds.) 1999. Climate Change and Global Crop Productivity. Wallingford and New York: CAB International. Rommens, C.M. 2007. Intragenic crop improvement: combining the benefits of traditional breeding and genetic engineering. Journal of Agricultural and Food Chemistry 55:4281-4288. Scientific Inference Systems Laboratory. 2007. The Computable Plant. Accessed on September 28, 2007 at http:// www.computableplant.org/. Serageldin, I. 1999. Biotechnology and food security in the 21st century. Science 285:387–389. Seymour, E., A.B. Hunter, S.L. Laursen, and T. Deantoni. 2004. Establishing the benefits of research experiences for undergraduates in the sciences: first findings from a three-year study. Science Education 88:493–534. Somerville, C. 2006. The billion-ton biofuel vision. Science 312:1277. Strauss, S.H., R. Lande, and G. Namkoong. 1992. Limitations of molecular-marker-aided selection in forest tree breeding. Canadian Journal of Forest Research 22:1050–1061. TAIR (The Arabidopsis Information Resource). 2007. AraCyc 4.0. Accessed on September 28, 2007 at http://www. arabidopsis.org/biocyc/. The Arabidopsis Genome Initiative. 2000. Analysis of the genome sequence of the flowering plant Arabidopsis thaliana. Nature 408:796–815. Traxler, G. 2004. The Economic Impacts of Biotechnology-based Technological Innovations: ESA Working Paper No. 04-08. Rome: Food and Agriculture Organization of the United Nations. Trenberth, K.E., P.D. Jones, P. Ambenje, R. Bojariu, D. Easterling, A. Klein Tank, D. Parker, F. Rahimzadeh, J.A. Renwick, M. Rusticucci, B. Soden, and P. zhai. 2007. Observations: surface and atmospheric climate change. In The Physical Science Basis. Contribution of Working Group  to the Fourth Assessment Report of the Inter- governmental Panel on Climate Change, edited by S. Solomon, D. Qin, M. Manning, z. Chen, M. Marquis, K.B. Averyt, M. Tignor, and H.L. Miller. New York: Cambridge University Press. Tuberosa, R., and S. Salvi. 2006. Genomics-based approaches to improve drought tolerance of crops. Trends in Plant Science 11:405–412. Tuskan, G.A., S. DiFazio, S. Jansson, J. Bohlmann, I. Grigoriev, U. Hellsten, N. Putnam, S. Ralph, S. Rombauts, A. Salamov, J. Schein, L. Sterck, A. Aerts, R.R. Bhalerao, R.P. Bhalerao, D. Blaudez, W. Boerjan, A. Brun, A. Brunner, V. Busov, M. Campbell, J. Carlson, M. Chalot, J. Chapman, G.L. Chen, D. Cooper, P.M. Coutinho, J. Couturier, S. Covert, Q. Cronk, R. Cunningham, J. Davis, S. Degroeve, A. Dejardin, C. dePamphilis, J. Detter, B. Dirks, I. Dubchak, S. Duplessis, J. Ehlting, B. Ellis, K. Gendler, D. Goodstein, M. Gribskov, J. Grimwood, A. Groover, L. Gunter, B. Hamberger, B. Heinze, Y. Helariutta, B. Henrissat, D. Holligan, R. Holt, W. Huang, N. Islam-Faridi, S. Jones, M. Jones-Rhoades, R. Jorgensen, C. Joshi, J. Kangasjarvi, J. Karlsson, C. Kelleher, R. Kirkpatrick, M. Kirst, A. Kohler, U. Kalluri, F. Larimer, J. Leebens-Mack, J.C. Leple, P. Locascio, Y. Lou, S. Lucas, F. Martin, B. Montanini, C. Napoli, D.R. Nelson, C. Nelson, K. Nieminen, O. Nilsson, V. Pereda, G. Peter, R. Philippe, G. Pilate, A. Poliakov, J. Razumovskaya, P. Richardson, C. Rinaldi, K. Ritland, P. Rouze, D. Ryaboy, J. Schmutz, J. Schrader, B. Segerman, H. Shin, A. Siddiqui, F. Sterky, A. Terry, C.J. Tsai, E. Uber- bacher, P. Unneberg, J. Vahala, K. Wall, S. Wessler, G. Yang, T. Yin, C. Douglas, M. Marra, G. Sandberg, Y. Van de Peer, and D. Rokhsar. 2006. The genome of black cottonwood, Populus trichocarpa (Torr. & Gray). Science 313:1596–1604.

OCR for page 115
achievements n at i o na l P l a n t g e n o m e i n i t i at i v e 0 of the United Nations. 1999. The world at six billion. Accessed on November 8, 2007 at http://www.un.org/esa/population/ publications/sixbillion/sixbillion.htm. University of Arizona. 2007. Teacher Internship in Plant Genomics Summer 2006. Accessed on September 28, 2007 at http://biotech.biology.arizona.edu/RET/TIPG.html. University of Arkansas. 2007. Workshops Organized by RiceCAP. Accessed on August 22, 2007 at http://www.uark. edu/ua/ricecap/outreach_workshops.htm. University of California, Davis. 2007. Wheat CAP: Coordinated Agricultural Project. Accessed on August 22, 2007 at http://maswheat.ucdavis.edu. Vasil, I.K. 2003. The science and politics of plant biotechnology—a personal perspective. Nature Biotechnology 21:849–851. Virginia Polytechnic Institute and State University. 2006. Fralin Biotechnology Center: Other Outreach Programs. Accessed on August 12, 2007 at http://www.biotech.vt.edu/outreach/programs.html. Washington University. 2005. Genomics in Education. Accessed on August 23, 2007 at http://www.nslc.wustl. edu/elgin/genomics/index.html. Whitham, T.G., J.K. Bailey, J.A. Schweitzer, S.M. Shuster, R.K. Bangert, C.J. LeRoy, E.V. Lonsdorf, G.J. Allan, S.P. DiFazio, B.M. Potts, D.G. Fischer, C.A. Gehring, R.L. Lindroth, J.C. Marks, S.C. Hart, G.M. Wimp, and S.C. Wooley. 2006. A framework for community and ecosystem genetics: from genes to ecosystems. Nature Reviews Genetics 7:510–523. Wiley, H.S., S.Y. Shvartsman, and D.A. Lauffenburger. 2003. Computational modeling of the EGF-receptor system: a paradigm for systems biology. Trends in Cell Biology 13:43–50. Wood, W.B., and J.M. Gentile. 2003. Teaching in a research context. Science 302:1510. Yan, L., A. Loukoianov, G. Tranquilli, M. Helguera, T. Fahima, and J. Dubcovsky. 2003. Positional cloning of the wheat vernalization gene VRN1. Proceedings of the National Academy of Sciences USA 100:6263–6268. Yan, L., A. Loukoianov, A. Blechl, G. Tranquilli, W. Ramakrishna, P. SanMiguel, J.L. Bennetzen, V. Echenique, and J. Dubcovsky. 2004. The wheat VRN2 gene is a flowering repressor down-regulated by vernalization. Science 303:1640–1644. Yan, L., D. Fu, C. Li, A. Blechl, G. Tranquilli, M. Bonafede, A. Sanchez, M. Valarik, S. Yasuda, and J. Dubcovsky. 2006. The wheat and barley vernalization gene VRN3 is an orthologue of FT. Proceedings of the National Academy of Sciences USA 103:19581–19586. Yu, J., and E.S. Buckler. 2006. Genetic association mapping and genome organization of maize. Current Opinion in Biotechnology 17:155–160. Yu, W., F. Han, z. Gao, J.M. Vega, and J.A. Birchler. 2007. Construction and behavior of engineered minichromo- somes in maize. Proceedings of the National Academy of Sciences USA 104:8924–8929. zauhar, R.J. 2001. University bioinformatics programs on the rise. Nature Biotechnology 19:285–286.