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Achievements of the National Plant Genome Initiative and New Horizons in Plant Biology (2008)

Chapter: F: List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research

« Previous: E: Summary of Grants Given by the National Plant Genome Initiative
Suggested Citation:"F: List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research." National Research Council. 2008. Achievements of the National Plant Genome Initiative and New Horizons in Plant Biology. Washington, DC: The National Academies Press. doi: 10.17226/12054.
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Page 144
Suggested Citation:"F: List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research." National Research Council. 2008. Achievements of the National Plant Genome Initiative and New Horizons in Plant Biology. Washington, DC: The National Academies Press. doi: 10.17226/12054.
×
Page 145
Suggested Citation:"F: List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research." National Research Council. 2008. Achievements of the National Plant Genome Initiative and New Horizons in Plant Biology. Washington, DC: The National Academies Press. doi: 10.17226/12054.
×
Page 146
Suggested Citation:"F: List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research." National Research Council. 2008. Achievements of the National Plant Genome Initiative and New Horizons in Plant Biology. Washington, DC: The National Academies Press. doi: 10.17226/12054.
×
Page 147
Suggested Citation:"F: List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research." National Research Council. 2008. Achievements of the National Plant Genome Initiative and New Horizons in Plant Biology. Washington, DC: The National Academies Press. doi: 10.17226/12054.
×
Page 148
Suggested Citation:"F: List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research." National Research Council. 2008. Achievements of the National Plant Genome Initiative and New Horizons in Plant Biology. Washington, DC: The National Academies Press. doi: 10.17226/12054.
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Page 149

Below is the uncorrected machine-read text of this chapter, intended to provide our own search engines and external engines with highly rich, chapter-representative searchable text of each book. Because it is UNCORRECTED material, please consider the following text as a useful but insufficient proxy for the authoritative book pages.

F List of Websites That Lead Principal Investigators of NPGI Grants Reported as the Top Five Websites Used for NPGI Research 144

A pp e n d i x F 145 Number of PIs Who Reported It as One of the Website Top Five Websites http://www.ncbi.nlm.nih.gov/ 120 http://www.arabidopsis.org/a 56 http://www.tigr.org 51 http://www.gramene.org a 37 http://www.maizegdb.orga 26 http://wheat.pw.usda.gov/GG2/index.shtmla 21 http://compbio.dfci.harvard.edu/tgi/ 12 http://www.plantgdb.org 10 http://www.jgi.doe.gov/ 9 http://signal.salk.edu 8 http://www.bioinfo.wsu.edu/gdra 7 http://www.genome.arizona.edu 7 http://www.google.com/ 7 http://www.maizesequence.org 7 http://expasy.org/ 6 http://www.ars-grin.gov/ 6 http://www.chromdb.org 6 http://www.comparative-legumes.orga 6 http://www.plantgenomics.iastate.edu/maize/ 6 http://www.plexdb.org/ 6 http://www.sgn.cornell.edu/a 6 IISI Web of Knowledge 6 http://mpss.udel.edu/ 5 http://www.ebi.ac.uk/ 5 http://www.medicago.org/ 5 http://www.softberry.com/berry.phtml 5 http://magi.plantgenomics.iastate.edu 4 http://soybase.agron.iastate.edu/ 4 http://compgenomics.ucdavis.edu/ 3 http://dendrome.ucdavis.edu/a 3 http://frodo.wi.mit.edu/cgi-bin/primer3/primer3_www.cgi 3 http://maswheat.ucdavis.edu/ 3 http://mips.gsf.de/ 3 http://www.biosci.ohio-state.edu/pcmb/Facilities/abrc/abrchome.htm 3 http://www.cazy.org/ 3

146 A pp e n d i x F Number of PIs Who Reported It as One of the Website Top Five Websites http://www.geneontology.org/ 3 http://www.genome.clemson.edu 3 http://www.panzea.org/ 3 https://www.genevestigator.ethz.ch/ 3 http://asrp.cgrb.oregonstate.edu 2 http://bioinformatics.med.yale.edu/rc/overview.jspx 2 http://cggc.agtec.uga.edu/ 2 http://cgpdb.ucdavis.edu/ 2 http://harvest.ucr.edu/ 2 http://microrna.sanger.ac.uk/ 2 http://rgp.dna.affrc.go.jp 2 http://virtualplant.org 2 http://www.agcol.arizona.edu/pave/cotton/ 2 http://www.bar.utoronto.ca/ 2 http://www.broad.mit.edu/annotation/fgi/ 2 http://www.ccrc.uga.edu/~mao/cellwall/main.htm 2 http://www.genome.jp/kegg/ 2 http://irri.org/ 2 http://www.maizearray.org/ 2 http://www.phytozome.net/sorghum 2 http://www.plantgenome.uga.edu 2 http://www.pseudomonas-syringae.org/ 2 http://www.sciencemag.org/ 2 http://www.shigen.nig.ac.jp/rice/oryzabase/top/top.jsp 2 http://www.tomatomap.net/ 2 http://www.weigelworld.org/resources/microarray/AtGenExpress/ 2 http://affymetrix.arabidopsis.info/narrays/experimentbrowse.pl 1 http://agricola.nal.usda.gov/ 1 http://aztec.stanford.edu/gfp/ 1 http://barleycap.coafes.umn.edu/a 1 http://barleypop.vrac.iastate.edu/BarleyBase/BarleyBase/ 1 http://bioweb.pasteur.fr/intro-uk.html 1 http://brassica.bbsrc.ac.uk/ 1 http://cabdirect.org/ 1 http://cdna01.dna.affrc.go.jp/cDNA/ 1 http://cellwall.genomics.purdue.edu 1

A pp e n d i x F 147 Number of PIs Who Reported It as One of the Website Top Five Websites http://charge.ucdavis.edu/ 1 http://comparative-legumes.org/ 1 http://compositdb.ucdavis.edu/ 1 http://cottonevolution.info/ 1 http://depts.washington.edu/agro/ 1 http://diurnal.cgrb.oregonstate.edu/ 1 http://en.wikipedia.org/wiki/Main_Page 1 http://evolution.genetics.washington.edu/phylip.html 1 http://frontend.bioinfo.rpi.edu/applications/mfold/cgi-bin/rna-form1.cgi 1 http://fungen.org/genediscovery/ 1 http://genetics.mgh.harvard.edu/sheenweb/main_page.html 1 http://java.sun.com/j2se/1.5.0/docs/api/allclasses-noframe.html 1 http://jsp.weigelworld.org 1 http://linkage.rockefeller.edu/soft/mapmaker/ 1 http://maize-mapping.plantgenomics.iastate.edu/ 1 http://niblrrs.ucdavis.edu/ 1 http://nybg.bio.nyu.edu/vicogenta 1 http://nypg.bio.nyu.edu/orthologid 1 http://orygenesdb.cirad.fr 1 http://pfam.janelia.org 1 http://phymap.ucdavis.edu:8080/barley/index.jsp 1 http://pir.georgetown.edu 1 http://plantgenomics.biology.yale.edu/ 1 http://plantrbp.uoregon.edu/ 1 http://plantsp.genomics.purdue.edu/ 1 http://popgenome.ag.utk.edu/mdb 1 http://psbc.ucdavis.edu/home/ 1 http://rana.lbl.gov/EisenSoftware.htm 1 http://ricegaas.dna.affrc.go.jp/usr/ 1 http://rkd.ucdavis.edu/ 1 http://searchlauncher.bcm.tmc.edu/ 1 http://sorgblast3.tamu.edu/index.html 1 http://soybeangenome.siu.edu 1 http://statgen.ncsu.edu/qtlcart/ 1 http://string.embl.de/ 1 http://ted.bti.cornell.edu/ 1

148 A pp e n d i x F Number of PIs Who Reported It as One of the Website Top Five Websites http://tilling.fhcrc.org:9366 1 http://titan.biotec.uiuc.edu/apple/background.shtml 1 http://tomet.bti.cornell.edu/ 1 http://tools.neb.com/NEBcutter2/index.php 1 http://tos.nias.affrc.go.jp 1 http://users.unimi.it/hidras/ 1 http://wheatdb.ucdavis.edu:8080/wheatdb/index.jsp 1 http://workbench.sdsc.edu 1 http://www.affymetrix.com/analysis/index.affx 1 http://www.aphis.usda.gov/ 1 http://www.arabidopsisthaliana.com/ 1 http://www.avrdc.org/ 1 http://www.bio.purdue.edu/people/faculty/gelvin/gelvinweb/main.html 1 http://www.bioinformatics.org/ 1 http://www.bioinformatics2.wsu.edu/cgi-bin/Athena/cgi/home.pl 1 http://www.blast2go.de 1 http://www.bmb.leeds.ac.uk/staff/jpk/antibodies.htm 1 http://www.brassica.info/a 1 http://www.ccrc.uga.edu/~mao/cellwall/main.htm 1 http://www.ccts.uky.edu/Research/microRNA/miRNADesignOne.aspx 1 http://www.conifergdb.org/ 1 http://www.faculty.ucr.edu/~tgirke/Cellwall/index.html 1 http://www.facultyof1000.com/search/pm/advanced 1 http://www.fgsc.net 1 http://www.fungen.org/ 1 http://www.genome.ou.edu/medicago.html 1 http://www.gmod.org/ 1 http://www.graingenes.orga 1 http://www.libraries.rutgers.edu/rul/rr_gateway/ejournals/ejournals.shtml 1 http://www.maizegenetics.net/ 1 http://www.mgel.msstate.edu/ 1 http://www.mgosdb.org/ 1 http://www.mimulusevolution.org/ 1 http://www.nature.com/index.html 1 http://www.ncgr.org/ourwork/#lis 1 http://www.nhm.ac.uk/research-curation/projects/solanaceaesource// 1

A pp e n d i x F 149 Number of PIs Who Reported It as One of the Website Top Five Websites http://www.noble.org/medicago 1 http://www.nsf.gov/ 1 http://www.oardc.ohio-state.edu/vanderknaap 1 http://www.omap.org 1 http://www.ornl.gov/sci/ipgc/ a 1 http://www.phytome.org 1 http://www.pir.uniprot.org/ 1 http://www.plantgenomeoutreach.eeob.iastate.edu/index.htm 1 http://www.pnas.org 1 http://www.premierbiosoft.com/netprimer/netprlaunch/netprlaunch.html 1 http://www.proweb.org/input/ 1 http://www.psc.edu/biomed/genedoc 1 http://www.purdue.edu/discoverypark/ionomics 1 http://www.repeatmasker.org 1 http://www.sanger.ac.uk/ 1 http://www.scabusa.org/ 1 http://www.scholar.google.com 1 http://www.sciencemuseum.org.uk/antenna/waterproofrice/ 1 http://www.tm4.org/mev.html 1 http://www.uniprot.org 1 http://www.wikipedia.org/ 1 http://www.zincfingers.org 1 http://xyloglucan.prl.msu.edu 1 https://www.fastlane.nsf.gov/fastlane.jsp 1 KIREN 1 LIS 1 VectorNTI 1 aDenotes Websites that are listed in Table 2-3 as examples of Websites that are direct results of the National Plant Genome Initiative and the Interagency Working Group on Plant Genomes’ collaborations.

Next: G: Impact Factor of Journals in Which Awardees of NPGI Grants Published Their Articles »
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Life on Earth would be impossible without plants. Humans rely on plants for most clothing, furniture, food, as well as for many pharmaceuticals and other products. Plant genome sciences are essential to understanding how plants function and how to develop desirable plant characteristics. For example, plant genomic science can contribute to the development of plants that are drought-resistant, those that require less fertilizer, and those that are optimized for conversion to fuels such as ethanol and biodiesel. The National Plant Genome Initiative (NPGI) is a unique, cross-agency funding enterprise that has been funding and coordinating plant genome research successfully for nine years. Research breakthroughs from NPGI and the National Science Foundation (NSF) Arabidopsis 2010 Project, such as how the plant immune system controls pathogen defense, demonstrate that the plant genome science community is vibrant and capable of driving technological advancement. This book from the National Research Council concludes that these programs should continue so that applied programs on agriculture, bioenergy, and others will always be built on a strong foundation of fundamental plant biology research.

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